RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 CFAP53Q96M91 514 aa10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 ZNF214Q9UL59 606 aaPredicted RBP10.09□□□□□ -0.79
FNDC3B-211ENST00000490832 LTBP3Q9NS15 1303 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 KLF4O43474 513 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 TOMM70O94826 608 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 CBX7O95931 251 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 GRIK1P39086 918 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 NBPF12Q5TAG4 269 aaPredicted RBP10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 SOGA3Q5TF21 947 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 ZNF622Q969S3 477 aaKnown RBP eCLIP10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 FMNL2Q96PY5 1086 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 MIS18AQ9NYP9 233 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 KCNH3Q9ULD8 1083 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 USP16Q9Y5T5 823 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 CEMIPQ8WUJ3 1361 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 CACNA1SQ13698 1873 aa10.08□□□□□ -0.8
FNDC3B-211ENST00000490832 A0A087WZG4 1122 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 CAMTA2O94983 1202 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 CEACAM5P06731 702 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 ITGB7P26010 798 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 PRR5LQ6MZQ0 368 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 C16orf71Q8IYS4 520 aaPredicted RBP10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 TTLL6Q8N841 843 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 FAM181AQ8N9Y4 354 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 TRIM55Q9BYV6 548 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 MKRN2Q9H000 416 aaKnown RBP10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 RNF112Q9ULX5 631 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 TIAM2Q8IVF5 1701 aa10.07□□□□□ -0.8
FNDC3B-211ENST00000490832 PRR33A8MZF0 331 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 H0YIN7 160 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 ITIH2P19823 946 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 RAB33AQ14088 237 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 FXNQ16595 210 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 LARP1BQ659C4 914 aaKnown RBP10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 PPFIBP1Q86W92 1011 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 ZNF512BQ96KM6 892 aaPredicted RBP10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 CAPN6Q9Y6Q1 641 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 U3KQE9 123 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 BCORQ6W2J9 1755 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 KDM2BQ8NHM5 1336 aa10.06□□□□□ -0.8
FNDC3B-211ENST00000490832 SLX4Q8IY92 1834 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 WDR90Q96KV7 1748 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 NPHP1O15259 732 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 ADAM23O75077 832 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 IL6STP40189 918 aaPredicted RBP10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 SLC7A5Q01650 507 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 GNPTABQ3T906 1256 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 VHLLQ6RSH7 139 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 CNBD1Q8NA66 436 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 DTWD2Q8NBA8 298 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 PIWIL2Q8TC59 973 aaKnown RBP10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 NETO1Q8TDF5 533 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 Q96M66 194 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 DNAJC2Q99543 621 aaKnown RBP10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 THUMPD2Q9BTF0 503 aaKnown RBP10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 NUDCQ9Y266 331 aa10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 TNRC6CQ9HCJ0 1690 aaKnown RBP10.05□□□□□ -0.8
FNDC3B-211ENST00000490832 FAM155AB1AL88 458 aaPredicted RBP10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 C9IYK1 514 aa10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 IFI16Q16666 785 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 TDRD10Q5VZ19 366 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 CCDC144CPQ8IYA2 1237 aa10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 DNAJC5GQ8N7S2 189 aa10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 RTF1Q92541 710 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 TEX13AQ9BXU3 409 aaPredicted RBP10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 ZC3H7BQ9UGR2 993 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 PCDHB10Q9UN67 800 aa10.04□□□□□ -0.8
FNDC3B-211ENST00000490832 DLG5Q8TDM6 1919 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 COBLO75128 1261 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 HOXA10P31260 410 aaPredicted RBP10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 CLCN7P51798 805 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 TNK2Q07912 1038 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 NCAPHQ15003 741 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 NKPD1Q17RQ9 610 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 OLFM4Q6UX06 510 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 SPACA3Q8IXA5 215 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 PLD6Q8N2A8 252 aaKnown RBP10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 NGEFQ8N5V2 710 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 BRIP1Q9BX63 1249 aa10.03□□□□□ -0.8
FNDC3B-211ENST00000490832 FER1L6Q2WGJ9 1857 aa10.02□□□□□ -0.8
FNDC3B-211ENST00000490832 LRRN2O75325 713 aa10.02□□□□□ -0.81
FNDC3B-211ENST00000490832 SNRPA1P09661 255 aaKnown RBP10.02□□□□□ -0.81
FNDC3B-211ENST00000490832 PDE6BP35913 854 aa10.02□□□□□ -0.81
FNDC3B-211ENST00000490832 HLFQ16534 295 aa10.02□□□□□ -0.81
FNDC3B-211ENST00000490832 DDR2Q16832 855 aa10.02□□□□□ -0.81
FNDC3B-211ENST00000490832 NBPF9Q3BBW0 867 aa10.02□□□□□ -0.81
FNDC3B-211ENST00000490832 NBPF5PQ86XG9 351 aaPredicted RBP10.02□□□□□ -0.81
FNDC3B-211ENST00000490832 KLHL6Q8WZ60 621 aa10.02□□□□□ -0.81
FNDC3B-211ENST00000490832 PLAGL2Q9UPG8 496 aa10.02□□□□□ -0.81
FNDC3B-211ENST00000490832 TMEM265A0A087WTH1 108 aa10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 GLTPD2A6NH11 291 aa10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 DDAH1O94760 285 aa10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 TP53P04637 393 aaPredicted RBP10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 ST5P78524 1137 aa10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 AUHQ13825 339 aaKnown RBP10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 MSMPQ1L6U9 139 aa10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 KIAA1211LQ6NV74 962 aa10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 C6orf15Q6UXA7 325 aaPredicted RBP10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 FAM178BQ8IXR5 827 aa10.01□□□□□ -0.81
FNDC3B-211ENST00000490832 CELF2-AS1Q8N7Q2 184 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms