RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 STK31Q9BXU1 1019 aa5.91□□□□□ -1.46
CSTF1-205ENST00000490539 ASCC2Q9H1I8 757 aaPredicted RBP5.91□□□□□ -1.46
CSTF1-205ENST00000490539 MYH16Q9H6N6 1097 aa5.91□□□□□ -1.46
CSTF1-205ENST00000490539 EHMT1Q9H9B1 1298 aa5.91□□□□□ -1.46
CSTF1-205ENST00000490539 GPATCH2Q9NW75 528 aa5.91□□□□□ -1.46
CSTF1-205ENST00000490539 LMCD1Q9NZU5 365 aa5.91□□□□□ -1.46
CSTF1-205ENST00000490539 NARFQ9UHQ1 456 aa5.91□□□□□ -1.46
CSTF1-205ENST00000490539 ZBTB1Q9Y2K1 713 aa5.91□□□□□ -1.46
CSTF1-205ENST00000490539 SOS1Q07889 1333 aaPredicted RBP5.91□□□□□ -1.46
CSTF1-205ENST00000490539 USP42Q9H9J4 1324 aaKnown RBP5.91□□□□□ -1.46
CSTF1-205ENST00000490539 PAPPAQ13219 1627 aa5.91□□□□□ -1.46
CSTF1-205ENST00000490539 QSER1Q2KHR3 1735 aa5.91□□□□□ -1.46
CSTF1-205ENST00000490539 TAF1LQ8IZX4 1826 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 SLC22A31A6NKX4 558 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 PRR33A8MZF0 331 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 CHL1O00533 1208 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 A1BGP04217 495 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 GYS1P13807 737 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 EIF5P55010 431 aaKnown RBP5.9□□□□□ -1.46
CSTF1-205ENST00000490539 RNF4P78317 190 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 ST5P78524 1137 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 ZP2Q05996 745 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 ZNF792Q3KQV3 632 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 ZNF394Q53GI3 561 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 FBLN7Q53RD9 439 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 SLC23A3Q6PIS1 610 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 CLEC4GQ6UXB4 293 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 SLITRK4Q8IW52 837 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 WDR63Q8IWG1 891 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 DNAJB8Q8NHS0 232 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 RNF141Q8WVD5 230 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 ASPNQ9BXN1 380 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.9□□□□□ -1.46
CSTF1-205ENST00000490539 DBF4Q9UBU7 674 aaPredicted RBP5.9□□□□□ -1.46
CSTF1-205ENST00000490539 USP16Q9Y5T5 823 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 U3KQE9 123 aa5.9□□□□□ -1.46
CSTF1-205ENST00000490539 ADAMTS7Q9UKP4 1686 aa5.9□□□□□ -1.47
CSTF1-205ENST00000490539 IL16Q14005 1332 aa5.9□□□□□ -1.47
CSTF1-205ENST00000490539 VIRMAQ69YN4 1812 aaKnown RBP5.9□□□□□ -1.47
CSTF1-205ENST00000490539 H3BS24 57 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 KCNQ3O43525 872 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 DDX58O95786 925 aaKnown RBP5.89□□□□□ -1.47
CSTF1-205ENST00000490539 HSPA8P11142 646 aaKnown RBP5.89□□□□□ -1.47
CSTF1-205ENST00000490539 HSP90B1P14625 803 aaKnown RBP5.89□□□□□ -1.47
CSTF1-205ENST00000490539 MYL6BP14649 208 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 CCNFP41002 786 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 CRKP46108 304 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 TGFB2P61812 414 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 HSP90AB3PQ58FF7 597 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 ARSHQ5FYA8 562 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 CCDC30Q5VVM6 783 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 TMPRSS7Q7RTY8 843 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 UBE2FQ969M7 185 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 EAF1Q96JC9 268 aaPredicted RBP5.89□□□□□ -1.47
CSTF1-205ENST00000490539 SNX27Q96L92 541 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 FERD3LQ96RJ6 166 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 KIF2CQ99661 725 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 NYXQ9GZU5 481 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 TMX4Q9H1E5 349 aaPredicted RBP5.89□□□□□ -1.47
CSTF1-205ENST00000490539 HYPKQ9NX55 129 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 ZSWIM5Q9P217 1185 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 DDX41Q9UJV9 622 aaKnown RBP5.89□□□□□ -1.47
CSTF1-205ENST00000490539 NOP58Q9Y2X3 529 aaKnown RBP5.89□□□□□ -1.47
CSTF1-205ENST00000490539 PCDHGB7Q9Y5F8 929 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 KCPQ6ZWJ8 1503 aa5.89□□□□□ -1.47
CSTF1-205ENST00000490539 COL24A1Q17RW2 1714 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 UBR3Q6ZT12 1888 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 DLG5Q8TDM6 1919 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 ERVV-1B6SEH8 477 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 RGS13O14921 159 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 PDE6BP35913 854 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 TNK2Q07912 1038 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 COL9A2Q14055 689 aaPredicted RBP5.88□□□□□ -1.47
CSTF1-205ENST00000490539 CDCP2Q5VXM1 449 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 FBXW10Q5XX13 1052 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 NLRC3Q7RTR2 1065 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 NBPF5PQ86XG9 351 aaPredicted RBP5.88□□□□□ -1.47
CSTF1-205ENST00000490539 C16orf71Q8IYS4 520 aaPredicted RBP5.88□□□□□ -1.47
CSTF1-205ENST00000490539 CNBD1Q8NA66 436 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 BAHD1Q8TBE0 780 aaPredicted RBP5.88□□□□□ -1.47
CSTF1-205ENST00000490539 PPP1R13LQ8WUF5 828 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 CCDC136Q96JN2 1154 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 KREMEN1Q96MU8 473 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 RC3H2Q9HBD1 1191 aaKnown RBP5.88□□□□□ -1.47
CSTF1-205ENST00000490539 DDX21Q9NR30 783 aaKnown RBP eCLIP5.88□□□□□ -1.47
CSTF1-205ENST00000490539 SRP68Q9UHB9 627 aaKnown RBP5.88□□□□□ -1.47
CSTF1-205ENST00000490539 NIP7Q9Y221 180 aaKnown RBP eCLIP5.88□□□□□ -1.47
CSTF1-205ENST00000490539 ST14Q9Y5Y6 855 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 CARMIL3Q8ND23 1372 aa5.88□□□□□ -1.47
CSTF1-205ENST00000490539 COL5A3P25940 1745 aaPredicted RBP5.88□□□□□ -1.47
CSTF1-205ENST00000490539 H0YIN7 160 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 ELL2O00472 640 aaPredicted RBP5.87□□□□□ -1.47
CSTF1-205ENST00000490539 SERPINB2P05120 415 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 ANP32AP39687 249 aaKnown RBP5.87□□□□□ -1.47
CSTF1-205ENST00000490539 CD96P40200 585 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 CLCQ05315 142 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 CLEC16AQ2KHT3 1053 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 PARP10Q53GL7 1025 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 OVOS1Q6IE37 1185 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 NFXL1Q6ZNB6 911 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms