RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 NMRK2Q9NPI5 230 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 GPRC5CQ9NQ84 441 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 MAGEC2Q9UBF1 373 aaPredicted RBP6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 TNPO3Q9Y5L0 923 aaKnown RBP6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 QSER1Q2KHR3 1735 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 WASH4PA8MWX3 477 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 IGF2BP3O00425 579 aaKnown RBP eCLIP6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 OPA1O60313 960 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 CPP00450 1065 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 GATA4P43694 442 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 NEK4P51957 841 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 NFKB2Q00653 900 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 HABP4Q5JVS0 413 aaKnown RBP6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 KCNT2Q6UVM3 1135 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 PIWIL2Q8TC59 973 aaKnown RBP6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 LEO1Q8WVC0 666 aaPredicted RBP6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 PTPRN2Q92932 1015 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 TCTN2Q96GX1 697 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 TRIM39Q9HCM9 518 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 GPATCH2Q9NW75 528 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 STK32BQ9NY57 414 aa6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 DDX56Q9NY93 547 aaKnown RBP6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 COL14A1Q05707 1796 aaKnown RBP6.62□□□□□ -1.35
SSX2IP-208ENST00000490476 EIF2AK4Q9P2K8 1649 aaKnown RBP6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 PRXQ9BXM0 1461 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 ZFYVE9O95405 1425 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 ADAMTS13Q76LX8 1427 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 PTPRUQ92729 1446 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 SSU72P8A0A1W2PR75 194 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 C2orf71A6NGG8 1288 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 GSG1L2A8MUP6 293 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 EFCAB14O75071 495 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 RASGRP1O95267 797 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 F13BP05160 661 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 THBDP07204 575 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 ZNF865P0CJ78 1059 aaPredicted RBP6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 IFNGR1P15260 489 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 NOP2P46087 812 aaKnown RBP6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 SEPHS1P49903 392 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 CYP27A1Q02318 531 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 ZNF460Q14592 562 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 SLC35F1Q5T1Q4 408 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 DENND5AQ6IQ26 1287 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 PPIL6Q8IXY8 311 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 ZNF655Q8N720 491 aaPredicted RBP6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 DAGLBQ8NCG7 672 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 MAGEB10Q96LZ2 347 aaPredicted RBP6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 HDAC8Q9BY41 377 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 ZSWIM5Q9P217 1185 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 PCDHA9Q9Y5H5 950 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 BACE2Q9Y5Z0 518 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 U3KQE9 123 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 PKD1L3Q7Z443 1732 aa6.61□□□□□ -1.35
SSX2IP-208ENST00000490476 NPHP3Q7Z494 1330 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 WDR64B1ANS9 1081 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 H3BS24 57 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 FKTNO75072 461 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 SYPP08247 313 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 GSTM1P09488 218 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 CDKN1CP49918 316 aaPredicted RBP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 CYP4F3Q08477 520 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 FAM50AQ14320 339 aaKnown RBP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 TRIM61Q5EBN2 209 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 RNF43Q68DV7 783 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 PRR23CQ6ZRP0 262 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 C22orf34Q6ZV56 151 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 RNF180Q86T96 592 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 PRPF38AQ8NAV1 312 aaKnown RBP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 ATL2Q8NHH9 583 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 ENOX1Q8TC92 643 aaKnown RBP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 DDX1Q92499 740 aaKnown RBP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 C1orf159Q96HA4 380 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 SCLYQ96I15 445 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 FCRL3Q96P31 734 aaPredicted RBP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 ORAI2Q96SN7 254 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 OSBPL1AQ9BXW6 950 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 GPR62Q9BZJ7 368 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 DUSP15Q9H1R2 295 aaPredicted RBP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 TRIT1Q9H3H1 467 aaKnown RBP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 ATG3Q9NT62 314 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 INTS7Q9NVH2 962 aaKnown RBP6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 CLEC1BQ9P126 229 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 KLHL42Q9P2K6 505 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 RNF112Q9ULX5 631 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 MAPRE3Q9UPY8 281 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 ATP8A1Q9Y2Q0 1164 aa6.6□□□□□ -1.35
SSX2IP-208ENST00000490476 AURKAO14965 403 aa6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 MEFVO15553 781 aaPredicted RBP6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 KPNA6O60684 536 aa6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 CRTAMO95727 393 aa6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 APPP05067 770 aa6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 SCG5P05408 212 aa6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 PLS3P13797 630 aa6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 VAV1P15498 845 aa6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 TPP2P29144 1249 aaPredicted RBP6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 GUCY1A3Q02108 690 aa6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 SLC15A2Q16348 729 aa6.59□□□□□ -1.35
SSX2IP-208ENST00000490476 MTDHQ86UE4 582 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms