RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 THEGQ9P2T0 379 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 GTF2IRD1Q9UHL9 959 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 BAZ2BQ9UIF8 2168 aaKnown RBP11.96□□□□□ -0.49
TTC28-207ENST00000490475 SCN5AQ14524 2016 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 EMSYQ7Z589 1322 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 MYCLP12524 364 aaPredicted RBP11.96□□□□□ -0.49
TTC28-207ENST00000490475 HOXD8P13378 290 aaPredicted RBP11.96□□□□□ -0.49
TTC28-207ENST00000490475 PSEN2P49810 448 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 CHMP4BP1P59074 171 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 TROAPQ12815 778 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 NEDD9Q14511 834 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 PGM5Q15124 567 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 CELF3Q5SZQ8 465 aaKnown RBP11.96□□□□□ -0.49
TTC28-207ENST00000490475 LRRC8DQ7L1W4 858 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 HOMER1Q86YM7 354 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 IGDCC4Q8TDY8 1250 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 CUL5Q93034 780 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 SPATA33Q96N06 139 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 MLXIPQ9HAP2 919 aa11.96□□□□□ -0.49
TTC28-207ENST00000490475 SEC63Q9UGP8 760 aaKnown RBP11.96□□□□□ -0.49
TTC28-207ENST00000490475 ABHD14A-ACY1A0A1B0GW23 586 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 HAS3O00219 553 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 OPLAHO14841 1288 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 PRC1O43663 620 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 DDAH1O94760 285 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 CALM1P0DP23 149 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 CALM2P0DP24 149 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 CALM3P0DP25 149 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 GNAT1P11488 350 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 POU3F3P20264 500 aaPredicted RBP11.95□□□□□ -0.5
TTC28-207ENST00000490475 MRPS5P82675 430 aaKnown RBP11.95□□□□□ -0.5
TTC28-207ENST00000490475 MFSD10Q14728 455 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 KIAA0753Q2KHM9 967 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 ADCK5Q3MIX3 580 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 RNF20Q5VTR2 975 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 GDF6Q6KF10 455 aaPredicted RBP11.95□□□□□ -0.5
TTC28-207ENST00000490475 CNKSR3Q6P9H4 555 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 TEX2Q8IWB9 1127 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 GIMAP8Q8ND71 665 aaPredicted RBP11.95□□□□□ -0.5
TTC28-207ENST00000490475 KAT2BQ92831 832 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 RRP36Q96EU6 259 aaKnown RBP11.95□□□□□ -0.5
TTC28-207ENST00000490475 TMEM87BQ96K49 555 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 SPZ1Q9BXG8 430 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 USP26Q9BXU7 913 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 YBX2Q9Y2T7 364 aaKnown RBP11.95□□□□□ -0.5
TTC28-207ENST00000490475 EYSQ5T1H1 3165 aa11.95□□□□□ -0.5
TTC28-207ENST00000490475 CHD9Q3L8U1 2897 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 NOP56O00567 594 aaKnown RBP11.94□□□□□ -0.5
TTC28-207ENST00000490475 CAND2O75155 1236 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 REC8O95072 547 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 GGPS1O95749 300 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 CXCL10P02778 98 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 CKBP12277 381 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 MCM5P33992 734 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 RABGGTBP53611 331 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 IKBKEQ14164 716 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 TSGA10IPQ3SY00 556 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 HERC6Q8IVU3 1022 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 TET1Q8NFU7 2136 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 VWCEQ96DN2 955 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 CDHR1Q96JP9 859 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 PIGSQ96S52 555 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 LRRC2Q9BYS8 371 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 HDAC6Q9UBN7 1215 aa11.94□□□□□ -0.5
TTC28-207ENST00000490475 FRMPD4Q14CM0 1322 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 KAT6AQ92794 2004 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 PIK3CDO00329 1044 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 FIBPO43427 364 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 TLL1O43897 1013 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 PPP1R11O60927 126 aaPredicted RBP11.93□□□□□ -0.5
TTC28-207ENST00000490475 CA3P07451 260 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 CPA1P15085 419 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 UBA1P22314 1058 aaKnown RBP11.93□□□□□ -0.5
TTC28-207ENST00000490475 HOXA13P31271 388 aaPredicted RBP11.93□□□□□ -0.5
TTC28-207ENST00000490475 ICAM3P32942 547 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 HSPA4P34932 840 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 EXOSC10Q01780 885 aaKnown RBP11.93□□□□□ -0.5
TTC28-207ENST00000490475 FCHSD1Q86WN1 690 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 SMARCC2Q8TAQ2 1214 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 PPM1EQ8WY54 764 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 KCNB2Q92953 911 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 INPP4AQ96PE3 977 aaPredicted RBP11.93□□□□□ -0.5
TTC28-207ENST00000490475 NEK1Q96PY6 1258 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 ASB2Q96Q27 587 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 SENP7Q9BQF6 1050 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 ALG1Q9BT22 464 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 ZBED2Q9BTP6 218 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 LMCD1Q9NZU5 365 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 ZNF215Q9UL58 517 aaPredicted RBP11.93□□□□□ -0.5
TTC28-207ENST00000490475 SNX14Q9Y5W7 946 aa11.93□□□□□ -0.5
TTC28-207ENST00000490475 C17orf102A2RUQ5 167 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 H3BRB1 525 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 TNFRSF10AO00220 468 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 CYTH3O43739 400 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 RGS20O76081 388 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 RPLP2P05387 115 aaKnown RBP11.92□□□□□ -0.5
TTC28-207ENST00000490475 LIFRP42702 1097 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 WDR5P61964 334 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms