RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 NR5A1Q13285 461 aa16.42■□□□□ 0.22
SRGAP3-208ENST00000490348 KCNA10Q16322 511 aa16.42■□□□□ 0.22
SRGAP3-208ENST00000490348 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
SRGAP3-208ENST00000490348 KRT40Q6A162 431 aa16.42■□□□□ 0.22
SRGAP3-208ENST00000490348 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
SRGAP3-208ENST00000490348 OR6J1Q8NGC5 347 aa16.42■□□□□ 0.22
SRGAP3-208ENST00000490348 EHMT1Q9H9B1 1298 aa16.42■□□□□ 0.22
SRGAP3-208ENST00000490348 JADE2Q9NQC1 790 aa16.42■□□□□ 0.22
SRGAP3-208ENST00000490348 IGLV3-22A0A075B6J6 115 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 FIBPO43427 364 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 SORBS3O60504 671 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 ATP9AO75110 1047 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 TGFB3P10600 412 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 GUCY1B3Q02153 619 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 GNPTABQ3T906 1256 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 CEP55Q53EZ4 464 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 GNASQ5JWF2 1037 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 SNX21Q969T3 373 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 EMID1Q96A84 441 aaPredicted RBP16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 GPRASP2Q96D09 838 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 MXRA8Q9BRK3 442 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 AP5M1Q9H0R1 490 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 C11orf49Q9H6J7 331 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 PHF24Q9UPV7 400 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 TELO2Q9Y4R8 837 aa16.41■□□□□ 0.22
SRGAP3-208ENST00000490348 FAM205CA6NFA0 338 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 A6NJR5 290 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 KBTBD13C9JR72 458 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 MEIS1O00470 390 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 KCNA2P16389 499 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 ACLYP53396 1101 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 MTMR1Q13613 665 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 CELF3Q5SZQ8 465 aaKnown RBP16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 MYSM1Q5VVJ2 828 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 KCNV1Q6PIU1 500 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 NECAB2Q7Z6G3 386 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 TBCKQ8TEA7 893 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 FERMT2Q96AC1 680 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 SPC25Q9HBM1 224 aa16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 LAMA2P24043 3122 aaKnown RBP16.4■□□□□ 0.22
SRGAP3-208ENST00000490348 A0A1W2PQ45 241 aaPredicted RBP16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 A0A1W2PQY0 241 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 BTBD18B2RXH4 712 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 GGPS1O95749 300 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 GH1P01241 217 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 ASGR1P07306 291 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 ARP10275 920 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 GJB2P29033 226 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 CIITAP33076 1130 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 KRT2P35908 639 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 NLRX1Q86UT6 975 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 DIS3L2Q8IYB7 885 aaKnown RBP16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 FBXO18Q8NFZ0 1043 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 AFG1LQ8WV93 481 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 LENG9Q96B70 501 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 TSEN34Q9BSV6 310 aaKnown RBP16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 SENP6Q9GZR1 1112 aaPredicted RBP16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 KCNH7Q9NS40 1196 aa16.39■□□□□ 0.21
SRGAP3-208ENST00000490348 K7ELQ4 463 aaPredicted RBP16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 INF2Q27J81 1249 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 HSDL1Q3SXM5 330 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 CXCL17Q6UXB2 119 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 FAM184AQ8NB25 1140 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 DOCK5Q9H7D0 1870 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 MOXD2PA6NHM9 499 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 MMP3P08254 477 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 TRIM29Q14134 588 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 NONOQ15233 471 aaKnown RBP eCLIP16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 PIK3AP1Q6ZUJ8 805 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 KRT25Q7Z3Z0 450 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 DHX37Q8IY37 1157 aaKnown RBP16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 PCSK9Q8NBP7 692 aaKnown RBP16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 PPTC7Q8NI37 304 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 AGO4Q9HCK5 861 aaKnown RBP16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 PKD2L1Q9P0L9 805 aa16.38■□□□□ 0.21
SRGAP3-208ENST00000490348 LAMA3Q16787 3333 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 TDP2O95551 362 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 CPT1AP50416 773 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 USP11P51784 963 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 ATN1P54259 1190 aaPredicted RBP16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 PURAQ00577 322 aaKnown RBP16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 LAMC2Q13753 1193 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 LRRC26Q2I0M4 334 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 METTL7BQ6UX53 244 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 NIPA1Q7RTP0 329 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 SPATA33Q96N06 139 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 UIMC1Q96RL1 719 aa16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.37■□□□□ 0.21
SRGAP3-208ENST00000490348 CCDC194A0A1B0GVG4 234 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 KIF28PB7ZC32 967 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 WNT7AO00755 349 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 MAFGO15525 162 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 HOXD8P13378 290 aaPredicted RBP16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 ZNF76P36508 570 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms