RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 FAM95CA0A1B0GW59 222 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 F8W031 263 aaPredicted RBP9.12□□□□□ -0.95
SMC6-209ENST00000489535 LARGE1O95461 756 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 BAG3O95817 575 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 BTDP43251 543 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 KIAA2012Q0VF49 1180 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 TRDNQ13061 729 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 TOB2Q14106 344 aaPredicted RBP9.12□□□□□ -0.95
SMC6-209ENST00000489535 ANKRD1Q15327 319 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 DALRD3Q5D0E6 543 aaKnown RBP9.12□□□□□ -0.95
SMC6-209ENST00000489535 SOGA3Q5TF21 947 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 RALYLQ86SE5 291 aaKnown RBP9.12□□□□□ -0.95
SMC6-209ENST00000489535 TBC1D10CQ8IV04 446 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 CERS5Q8N5B7 392 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 PSMD1Q99460 953 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 MXD3Q9BW11 206 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 TMPRSS13Q9BYE2 586 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 LRRC2Q9BYS8 371 aa9.12□□□□□ -0.95
SMC6-209ENST00000489535 MINDY4BA8MYZ0 360 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 BRD2P25440 801 aaKnown RBP9.11□□□□□ -0.95
SMC6-209ENST00000489535 USP5P45974 858 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 FGD1P98174 961 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 EXOSC10Q01780 885 aaKnown RBP9.11□□□□□ -0.95
SMC6-209ENST00000489535 PPARAQ07869 468 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 CUL4AQ13619 759 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 NFKBIBQ15653 356 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 HGSNATQ68CP4 663 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 MB21D2Q8IYB1 491 aaPredicted RBP9.11□□□□□ -0.95
SMC6-209ENST00000489535 STK11IPQ8N1F8 1099 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 SH3RF3Q8TEJ3 882 aaPredicted RBP9.11□□□□□ -0.95
SMC6-209ENST00000489535 KCNQ5Q9NR82 932 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 ATP8A2Q9NTI2 1148 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 ABI2Q9NYB9 513 aaPredicted RBP9.11□□□□□ -0.95
SMC6-209ENST00000489535 CHMP5Q9NZZ3 219 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 TTF2Q9UNY4 1162 aaKnown RBP9.11□□□□□ -0.95
SMC6-209ENST00000489535 SUGT1Q9Y2Z0 365 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 CD2APQ9Y5K6 639 aa9.11□□□□□ -0.95
SMC6-209ENST00000489535 GAKO14976 1311 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 NEDD4P46934 1319 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 GPR75-ASB3A0A0A6YYF3 556 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 PRC1O43663 620 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 MCM5P33992 734 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 DDIT3P35638 169 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 FKBP1AP62942 108 aaKnown RBP9.1□□□□□ -0.95
SMC6-209ENST00000489535 ME3Q16798 604 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 DACT2Q5SW24 774 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 AKNAD1Q5T1N1 836 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 STRIP1Q5VSL9 837 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 GIMAP6Q6P9H5 292 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 PAOXQ6QHF9 649 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 MFSD6Q6ZSS7 791 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 CHST3Q7LGC8 479 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 NCAPG2Q86XI2 1143 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 CERS3Q8IU89 383 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 CCDC83Q8IWF9 413 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 C12orf50Q8NA57 414 aaPredicted RBP9.1□□□□□ -0.95
SMC6-209ENST00000489535 SMG8Q8ND04 991 aaKnown RBP9.1□□□□□ -0.95
SMC6-209ENST00000489535 STAG1Q8WVM7 1258 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 SLC7A3Q8WY07 619 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 BRF1Q92994 677 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 PPP1R12CQ9BZL4 782 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 SUGCTQ9HAC7 445 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 DCP1AQ9NPI6 582 aaPredicted RBP9.1□□□□□ -0.95
SMC6-209ENST00000489535 ZNF277Q9NRM2 450 aaPredicted RBP9.1□□□□□ -0.95
SMC6-209ENST00000489535 ARPP21Q9UBL0 812 aaPredicted RBP9.1□□□□□ -0.95
SMC6-209ENST00000489535 TPCN1Q9ULQ1 816 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 DAGLAQ9Y4D2 1042 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 TACC3Q9Y6A5 838 aa9.1□□□□□ -0.95
SMC6-209ENST00000489535 WDR19Q8NEZ3 1342 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 CYP2D7A0A087X1C5 515 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 YDJCA8MPS7 323 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 B4E1Z4 1266 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 IARSP41252 1262 aaKnown RBP9.09□□□□□ -0.95
SMC6-209ENST00000489535 ANTXR2P58335 489 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 APOBRQ0VD83 1088 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 STK3Q13188 491 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 RRP12Q5JTH9 1297 aaKnown RBP9.09□□□□□ -0.95
SMC6-209ENST00000489535 CDPF1Q6NVV7 123 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 CTR9Q6PD62 1173 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 CYB5R4Q7L1T6 521 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 ZAR1Q86SH2 424 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 TEX11Q8IYF3 940 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 TGFBRAP1Q8WUH2 860 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 GATA6Q92908 595 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 INTS4Q96HW7 963 aaKnown RBP9.09□□□□□ -0.95
SMC6-209ENST00000489535 KRT23Q9C075 422 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 VPS33BQ9H267 617 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 RNF41Q9H4P4 317 aaPredicted RBP9.09□□□□□ -0.95
SMC6-209ENST00000489535 CNNM2Q9H8M5 875 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 VRTNQ9H8Y1 702 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 SPON1Q9HCB6 807 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 CWC22Q9HCG8 908 aaKnown RBP9.09□□□□□ -0.95
SMC6-209ENST00000489535 INCENPQ9NQS7 918 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 TOMM22Q9NS69 142 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 MCM9Q9NXL9 1143 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 FAM13BQ9NYF5 915 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 ANAPC4Q9UJX5 808 aa9.09□□□□□ -0.95
SMC6-209ENST00000489535 BAZ2BQ9UIF8 2168 aaKnown RBP9.08□□□□□ -0.96
SMC6-209ENST00000489535 NFKBIEO00221 500 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 TNFRSF10BO14763 440 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms