RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 SESTD1Q86VW0 696 aa15.52■□□□□ 0.08
LINC00173-204ENST00000489452 IL27Q8NEV9 243 aa15.52■□□□□ 0.08
LINC00173-204ENST00000489452 PPTC7Q8NI37 304 aa15.52■□□□□ 0.08
LINC00173-204ENST00000489452 CAGE1Q8TC20 777 aa15.52■□□□□ 0.08
LINC00173-204ENST00000489452 AFAP1L1Q8TED9 768 aa15.52■□□□□ 0.08
LINC00173-204ENST00000489452 GPKOWQ92917 476 aaPredicted RBP eCLIP15.52■□□□□ 0.08
LINC00173-204ENST00000489452 EMID1Q96A84 441 aaPredicted RBP15.52■□□□□ 0.08
LINC00173-204ENST00000489452 SPATA33Q96N06 139 aa15.52■□□□□ 0.08
LINC00173-204ENST00000489452 TSPYL2Q9H2G4 693 aaPredicted RBP15.52■□□□□ 0.08
LINC00173-204ENST00000489452 GTF2IRD1Q9UHL9 959 aa15.52■□□□□ 0.08
LINC00173-204ENST00000489452 MYH6P13533 1939 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 E7EWF7 191 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 GTPBP6O43824 516 aaPredicted RBP15.51■□□□□ 0.07
LINC00173-204ENST00000489452 TLL1O43897 1013 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 TFF2Q03403 129 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 WTAPQ15007 396 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 PGM5Q15124 567 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 HSDL1Q3SXM5 330 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 CELF3Q5SZQ8 465 aaKnown RBP15.51■□□□□ 0.07
LINC00173-204ENST00000489452 SPRED2Q7Z698 418 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 ADAMTS19Q8TE59 1207 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 KATNAL1Q9BW62 490 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 BCAS3Q9H6U6 928 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 MLXIPQ9HAP2 919 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 MTCH2Q9Y6C9 303 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 LAMA4Q16363 1823 aa15.51■□□□□ 0.07
LINC00173-204ENST00000489452 LCHNA4D1U4 455 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 CYTH3O43739 400 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 NBNO60934 754 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 PPFIA4O75335 1185 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 BAIAP3O94812 1187 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 CCND2P30279 289 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 WDR5P61964 334 aaKnown RBP15.5■□□□□ 0.07
LINC00173-204ENST00000489452 DEFB103AP81534 67 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 TCTN1Q2MV58 587 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 ZNF618Q5T7W0 954 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 FAM117BQ6P1L5 589 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 WNT8BQ93098 351 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 RIOX1Q9H6W3 641 aa15.5■□□□□ 0.07
LINC00173-204ENST00000489452 MAP3K20Q9NYL2 800 aaKnown RBP15.5■□□□□ 0.07
LINC00173-204ENST00000489452 MYH7BA7E2Y1 1941 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 PNMA6FA0A0J9YX94 578 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 HAS3O00219 553 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 F2P00734 622 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 GHRHRQ02643 423 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 TRAF1Q13077 416 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 PTK7Q13308 1070 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 HIC1Q14526 733 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 SART3Q15020 963 aaKnown RBP15.49■□□□□ 0.07
LINC00173-204ENST00000489452 KCNV1Q6PIU1 500 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 CATIPQ7Z7H3 387 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 NCOA7Q8NI08 942 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 NECAB3Q96P71 396 aaPredicted RBP15.49■□□□□ 0.07
LINC00173-204ENST00000489452 UHRF1Q96T88 793 aaPredicted RBP15.49■□□□□ 0.07
LINC00173-204ENST00000489452 RTEL1Q9NZ71 1219 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 KIAA1217Q5T5P2 1943 aa15.49■□□□□ 0.07
LINC00173-204ENST00000489452 UBA1P22314 1058 aaKnown RBP15.48■□□□□ 0.07
LINC00173-204ENST00000489452 TROAPQ12815 778 aa15.48■□□□□ 0.07
LINC00173-204ENST00000489452 TRIM71Q2Q1W2 868 aaKnown RBP15.48■□□□□ 0.07
LINC00173-204ENST00000489452 CNKSR3Q6P9H4 555 aa15.48■□□□□ 0.07
LINC00173-204ENST00000489452 MTUS1Q9ULD2 1270 aa15.48■□□□□ 0.07
LINC00173-204ENST00000489452 SGSM2O43147 1006 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 CXCL10P02778 98 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 TGFB3P10600 412 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 THPOP40225 353 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 KCNQ1P51787 676 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 ANTXR2P58335 489 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 GRB10Q13322 594 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 IKBKEQ14164 716 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 MBTPS1Q14703 1052 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 SAMD3Q8N6K7 520 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 IGDCC4Q8TDY8 1250 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 C16orf70Q9BSU1 422 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 MYL10Q9BUA6 226 aa15.47■□□□□ 0.07
LINC00173-204ENST00000489452 TCF20Q9UGU0 1960 aaKnown RBP15.46■□□□□ 0.07
LINC00173-204ENST00000489452 ABHD14A-ACY1A0A1B0GW23 586 aa15.46■□□□□ 0.07
LINC00173-204ENST00000489452 H3BRB1 525 aa15.46■□□□□ 0.07
LINC00173-204ENST00000489452 NOP56O00567 594 aaKnown RBP15.46■□□□□ 0.07
LINC00173-204ENST00000489452 PARNO95453 639 aaKnown RBP15.46■□□□□ 0.07
LINC00173-204ENST00000489452 HOXD8P13378 290 aaPredicted RBP15.46■□□□□ 0.07
LINC00173-204ENST00000489452 BMP1P13497 986 aa15.46■□□□□ 0.07
LINC00173-204ENST00000489452 MRPS9P82933 396 aaKnown RBP15.46■□□□□ 0.07
LINC00173-204ENST00000489452 RBL2Q08999 1139 aa15.46■□□□□ 0.07
LINC00173-204ENST00000489452 TRAF7Q6Q0C0 670 aa15.46■□□□□ 0.07
LINC00173-204ENST00000489452 USP17L6PQ6QN14 398 aa15.46■□□□□ 0.07
LINC00173-204ENST00000489452 CYFIP1Q7L576 1253 aa15.46■□□□□ 0.07
LINC00173-204ENST00000489452 ATP6V0A1Q93050 837 aa15.46■□□□□ 0.07
LINC00173-204ENST00000489452 RAD9AQ99638 391 aa15.46■□□□□ 0.07
LINC00173-204ENST00000489452 TUT1Q9H6E5 874 aaKnown RBP15.46■□□□□ 0.07
LINC00173-204ENST00000489452 RBM8AQ9Y5S9 174 aaKnown RBP15.46■□□□□ 0.07
LINC00173-204ENST00000489452 C17orf102A2RUQ5 167 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 RSPH10B2B2RC85 870 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 LGALS2P05162 132 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 RSPH10BP0C881 870 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 POU3F3P20264 500 aaPredicted RBP15.45■□□□□ 0.06
LINC00173-204ENST00000489452 SP4Q02446 784 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 GNPTABQ3T906 1256 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 UTP14CQ5TAP6 766 aaKnown RBP15.45■□□□□ 0.06
LINC00173-204ENST00000489452 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00173-204ENST00000489452 NFXL1Q6ZNB6 911 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms