RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
ACTN4-206ENST00000489451 SLC9A7Q96T83 725 aa13.69□□□□□ -0.22
ACTN4-206ENST00000489451 UBAC1Q9BSL1 405 aa13.69□□□□□ -0.22
ACTN4-206ENST00000489451 AMNQ9BXJ7 453 aa13.69□□□□□ -0.22
ACTN4-206ENST00000489451 CNNM2Q9H8M5 875 aa13.69□□□□□ -0.22
ACTN4-206ENST00000489451 CERS4Q9HA82 394 aa13.69□□□□□ -0.22
ACTN4-206ENST00000489451 HDAC6Q9UBN7 1215 aa13.69□□□□□ -0.22
ACTN4-206ENST00000489451 CTNNA3Q9UI47 895 aa13.69□□□□□ -0.22
ACTN4-206ENST00000489451 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
ACTN4-206ENST00000489451 LCHNA4D1U4 455 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 ZBTB5O15062 677 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 DHX16O60231 1041 aaKnown RBP13.68□□□□□ -0.22
ACTN4-206ENST00000489451 SORBS3O60504 671 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 EIF3JO75822 258 aaKnown RBP13.68□□□□□ -0.22
ACTN4-206ENST00000489451 PSEN2P49810 448 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 ANTXR2P58335 489 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 ZNF200P98182 395 aaPredicted RBP13.68□□□□□ -0.22
ACTN4-206ENST00000489451 NHLH1Q02575 133 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 BFSP2Q13515 415 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 MBTPS1Q14703 1052 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 GRM4Q14833 912 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 TMEM67Q5HYA8 995 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 HERC6Q8IVU3 1022 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 PPTC7Q8NI37 304 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 PHOSPHO2Q8TCD6 241 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 PIGSQ96S52 555 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 RIOX1Q9H6W3 641 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 MTCH2Q9Y6C9 303 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
ACTN4-206ENST00000489451 LPXNO60711 386 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 CXCL10P02778 98 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 CKBP12277 381 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 POU3F3P20264 500 aaPredicted RBP13.67□□□□□ -0.22
ACTN4-206ENST00000489451 CHMLP26374 656 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 WDR5P61964 334 aaKnown RBP13.67□□□□□ -0.22
ACTN4-206ENST00000489451 DEFB103AP81534 67 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 TROAPQ12815 778 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
ACTN4-206ENST00000489451 PGM5Q15124 567 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 SKIV2LQ15477 1246 aaKnown RBP13.67□□□□□ -0.22
ACTN4-206ENST00000489451 DGKDQ16760 1214 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 HSDL1Q3SXM5 330 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 MYSM1Q5VVJ2 828 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 LRRC8DQ7L1W4 858 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 VSIG10LQ86VR7 867 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 CAGE1Q8TC20 777 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 AFAP1L1Q8TED9 768 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 TELO2Q9Y4R8 837 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 PCDHA1Q9Y5I3 950 aa13.67□□□□□ -0.22
ACTN4-206ENST00000489451 MICAL3Q7RTP6 2002 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 ACTN1P12814 892 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 SELPP16109 830 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
ACTN4-206ENST00000489451 UBA1P22314 1058 aaKnown RBP13.66□□□□□ -0.22
ACTN4-206ENST00000489451 SEMA3FQ13275 785 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 LAMC2Q13753 1193 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 MFSD10Q14728 455 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 CELF3Q5SZQ8 465 aaKnown RBP13.66□□□□□ -0.22
ACTN4-206ENST00000489451 HOMER1Q86YM7 354 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 C16orf70Q9BSU1 422 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 ALG1Q9BT22 464 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 OSBPL7Q9BZF2 842 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 FTOQ9C0B1 505 aaKnown RBP eCLIP13.66□□□□□ -0.22
ACTN4-206ENST00000489451 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
ACTN4-206ENST00000489451 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 SIP14410 1827 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 PRR33A8MZF0 331 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 E7EWF7 191 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 BAIAP3O94812 1187 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 GGPS1O95749 300 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 MYCLP12524 364 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-206ENST00000489451 HOXC8P31273 242 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 MRPS9P82933 396 aaKnown RBP13.65□□□□□ -0.22
ACTN4-206ENST00000489451 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 ZNF618Q5T7W0 954 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 MB21D2Q8IYB1 491 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-206ENST00000489451 UIMC1Q96RL1 719 aa13.65□□□□□ -0.22
ACTN4-206ENST00000489451 IFIT3O14879 490 aaKnown RBP13.64□□□□□ -0.23
ACTN4-206ENST00000489451 SGSM2O43147 1006 aa13.64□□□□□ -0.23
ACTN4-206ENST00000489451 PTK7Q13308 1070 aa13.64□□□□□ -0.23
ACTN4-206ENST00000489451 CNKSR3Q6P9H4 555 aa13.64□□□□□ -0.23
ACTN4-206ENST00000489451 DHX37Q8IY37 1157 aaKnown RBP13.64□□□□□ -0.23
ACTN4-206ENST00000489451 IGDCC4Q8TDY8 1250 aa13.64□□□□□ -0.23
ACTN4-206ENST00000489451 ARNTL2Q8WYA1 636 aa13.64□□□□□ -0.23
ACTN4-206ENST00000489451 KHSRPQ92945 711 aaKnown RBP eCLIP13.64□□□□□ -0.23
ACTN4-206ENST00000489451 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
ACTN4-206ENST00000489451 FOXK2Q01167 660 aa13.63□□□□□ -0.23
ACTN4-206ENST00000489451 GRB10Q13322 594 aa13.63□□□□□ -0.23
ACTN4-206ENST00000489451 FCHSD1Q86WN1 690 aa13.63□□□□□ -0.23
ACTN4-206ENST00000489451 SAMD3Q8N6K7 520 aa13.63□□□□□ -0.23
ACTN4-206ENST00000489451 CCDC155Q8N6L0 562 aa13.63□□□□□ -0.23
ACTN4-206ENST00000489451 C7orf31Q8N865 590 aa13.63□□□□□ -0.23
ACTN4-206ENST00000489451 SPATA33Q96N06 139 aa13.63□□□□□ -0.23
ACTN4-206ENST00000489451 KATNAL1Q9BW62 490 aa13.63□□□□□ -0.23
ACTN4-206ENST00000489451 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
ACTN4-206ENST00000489451 PNMA6FA0A0J9YX94 578 aa13.62□□□□□ -0.23
ACTN4-206ENST00000489451 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
ACTN4-206ENST00000489451 TLL1O43897 1013 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms