RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 IL17RAQ96F46 866 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 LRIG1Q96JA1 1093 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 CDCA3Q99618 268 aaPredicted RBP9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 MTG1Q9BT17 334 aaPredicted RBP9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 ZNF214Q9UL59 606 aaPredicted RBP9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 GREB1Q4ZG55 1949 aa9.29□□□□□ -0.92
EXOSC3-206ENST00000489414 APC2O95996 2303 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 DENND4AQ7Z401 1863 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 PLXNA4Q9HCM2 1894 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 LAMTOR5O43504 91 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 SRGAP2BP0DMP2 458 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 HOXB8P17481 243 aaPredicted RBP9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 TECP42680 631 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 PUM3Q15397 648 aaKnown RBP9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 LPAL2Q16609 132 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 DBF4BQ8NFT6 615 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 ZNF384Q8TF68 577 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 DDX11Q96FC9 970 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 UBL7Q96S82 380 aaPredicted RBP9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 SLC4A5Q9BY07 1137 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 IFIH1Q9BYX4 1025 aaKnown RBP9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 RC3H2Q9HBD1 1191 aaKnown RBP9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 RAB23Q9ULC3 237 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 USTQ9Y2C2 406 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 LAS1LQ9Y4W2 734 aaKnown RBP9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 NEUROG3Q9Y4Z2 214 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 FOCADQ5VW36 1801 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 ADGRA3Q8IWK6 1321 aa9.28□□□□□ -0.92
EXOSC3-206ENST00000489414 DNHD1Q96M86 4753 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 NARSO43776 548 aaKnown RBP9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 CFHP08603 1231 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 LMOD3Q0VAK6 560 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 LRRC24Q50LG9 513 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 KIAA1755Q5JYT7 1200 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 PJA1Q8NG27 643 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 POF1BQ8WVV4 589 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 CYP26B1Q9NR63 512 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 MSRB2Q9Y3D2 182 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 DOPEY2Q9Y3R5 2298 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 PTPRQQ9UMZ3 2332 aa9.27□□□□□ -0.93
EXOSC3-206ENST00000489414 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 A0A1W2PRG0 241 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 GIPC1O14908 333 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 SEMA3EO15041 775 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 MMP3P08254 477 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 MYL3P08590 195 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 NOVA1P51513 510 aaKnown RBP9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 KCNC4Q03721 635 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 CNGB1Q14028 1251 aaPredicted RBP9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 AASDHQ4L235 1098 aaPredicted RBP9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 NAALADL2Q58DX5 795 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 SNRNP48Q6IEG0 339 aaKnown RBP9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 TATDN1Q6P1N9 297 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 REPS2Q8NFH8 660 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 HS3ST6Q96QI5 342 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 ADAM7Q9H2U9 754 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 SPATA6Q9NWH7 488 aaPredicted RBP9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 DENND2AQ9ULE3 1009 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 CA14Q9ULX7 337 aa9.26□□□□□ -0.93
EXOSC3-206ENST00000489414 ZFHX3Q15911 3703 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 FAM205CA6NFA0 338 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 LRRN2O75325 713 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 EOMESO95936 686 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 MECOMQ03112 1051 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 ITIH3Q06033 890 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 PLEKHG4Q58EX7 1191 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 STPG1Q5TH74 334 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 TEX11Q8IYF3 940 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 LINS1Q8NG48 757 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 RASGRP4Q8TDF6 673 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 HNRNPLLQ8WVV9 542 aaKnown RBP9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 KCNK12Q9HB15 430 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 PDGFCQ9NRA1 345 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 EMSYQ7Z589 1322 aa9.25□□□□□ -0.93
EXOSC3-206ENST00000489414 VWA5AO00534 786 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 GUCY1A2P33402 732 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 CPT1AP50416 773 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 ZNF618Q5T7W0 954 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 IQSEC1Q6DN90 963 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 GDF6Q6KF10 455 aaPredicted RBP9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 CES5AQ6NT32 575 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 TAPT1Q6NXT6 567 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 CELF5Q8N6W0 485 aaKnown RBP9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 KLHL23Q8NBE8 558 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 PURBQ96QR8 312 aaKnown RBP9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 FOXQ1Q9C009 403 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 GPHNQ9NQX3 736 aaPredicted RBP9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 PALD1Q9ULE6 856 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 COL6A6A6NMZ7 2263 aa9.24□□□□□ -0.93
EXOSC3-206ENST00000489414 CACNA1FO60840 1977 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 E9PSI1 815 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 ATXN7O15265 892 aaPredicted RBP9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 MTHFRP42898 656 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 PSEN1P49768 467 aa9.23□□□□□ -0.93
EXOSC3-206ENST00000489414 GSE1Q14687 1217 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms