RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 KRT26Q7Z3Y9 468 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 DHX37Q8IY37 1157 aaKnown RBP6.03□□□□□ -1.44
XRN1-213ENST00000489241 TMEM145Q8NBT3 493 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 STAG1Q8WVM7 1258 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 NINJ1Q92982 152 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 MMP19Q99542 508 aa6.03□□□□□ -1.44
XRN1-213ENST00000489241 OTOL1A6NHN0 477 aaPredicted RBP6.02□□□□□ -1.45
XRN1-213ENST00000489241 MEFVO15553 781 aaPredicted RBP6.02□□□□□ -1.45
XRN1-213ENST00000489241 MARCH6O60337 910 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 RFPL3O75679 317 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 TACR1P25103 407 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 LIMS1P48059 325 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 PABPC4Q13310 644 aaKnown RBP eCLIP6.02□□□□□ -1.45
XRN1-213ENST00000489241 SF1Q15637 639 aaKnown RBP6.02□□□□□ -1.45
XRN1-213ENST00000489241 NIM1KQ8IY84 436 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 NLGN2Q8NFZ4 835 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 CXorf38Q8TB03 319 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 FEZF2Q8TBJ5 459 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 FRS2Q8WU20 508 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 DIO2Q92813 273 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 MFSD3Q96ES6 412 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 METTL14Q9HCE5 456 aaKnown RBP6.02□□□□□ -1.45
XRN1-213ENST00000489241 DDX56Q9NY93 547 aaKnown RBP6.02□□□□□ -1.45
XRN1-213ENST00000489241 CLEC1BQ9P126 229 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 KLHL42Q9P2K6 505 aa6.02□□□□□ -1.45
XRN1-213ENST00000489241 APPP05067 770 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 KCNAB2Q13303 367 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 PRSS53Q2L4Q9 553 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 SLC35F1Q5T1Q4 408 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 CABP7Q86V35 215 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 THNSL2Q86YJ6 484 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 CPNE8Q86YQ8 564 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 PPIL6Q8IXY8 311 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 NPLOC4Q8TAT6 608 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 DCAF4Q8WV16 495 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 OSBP2Q969R2 916 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 RNF38Q9H0F5 515 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 NCOA5Q9HCD5 579 aaKnown RBP6.01□□□□□ -1.45
XRN1-213ENST00000489241 MRPS23Q9Y3D9 190 aaKnown RBP6.01□□□□□ -1.45
XRN1-213ENST00000489241 HCFC2Q9Y5Z7 792 aa6.01□□□□□ -1.45
XRN1-213ENST00000489241 A0A087X0B3 334 aa6□□□□□ -1.45
XRN1-213ENST00000489241 PLD2O14939 933 aa6□□□□□ -1.45
XRN1-213ENST00000489241 MYO1BO43795 1136 aa6□□□□□ -1.45
XRN1-213ENST00000489241 NPHS1O60500 1241 aa6□□□□□ -1.45
XRN1-213ENST00000489241 RAPGEF3O95398 923 aa6□□□□□ -1.45
XRN1-213ENST00000489241 GLI4P10075 376 aa6□□□□□ -1.45
XRN1-213ENST00000489241 MYCLP1P12525 358 aaPredicted RBP6□□□□□ -1.45
XRN1-213ENST00000489241 POU3F3P20264 500 aaPredicted RBP6□□□□□ -1.45
XRN1-213ENST00000489241 GTF2A2P52657 109 aa6□□□□□ -1.45
XRN1-213ENST00000489241 PRR5P85299 388 aa6□□□□□ -1.45
XRN1-213ENST00000489241 CYP4F3Q08477 520 aa6□□□□□ -1.45
XRN1-213ENST00000489241 TESK1Q15569 626 aa6□□□□□ -1.45
XRN1-213ENST00000489241 PLEKHG6Q3KR16 790 aa6□□□□□ -1.45
XRN1-213ENST00000489241 ERICH6BQ5W0A0 696 aa6□□□□□ -1.45
XRN1-213ENST00000489241 RSPO2Q6UXX9 243 aaPredicted RBP6□□□□□ -1.45
XRN1-213ENST00000489241 USP53Q70EK8 1073 aa6□□□□□ -1.45
XRN1-213ENST00000489241 TP53I13Q8NBR0 393 aaPredicted RBP6□□□□□ -1.45
XRN1-213ENST00000489241 KREMEN2Q8NCW0 462 aa6□□□□□ -1.45
XRN1-213ENST00000489241 CLUHP3Q96NS8 147 aa6□□□□□ -1.45
XRN1-213ENST00000489241 DBR1Q9UK59 544 aaKnown RBP6□□□□□ -1.45
XRN1-213ENST00000489241 ZC3H12DA2A288 527 aaKnown RBP5.99□□□□□ -1.45
XRN1-213ENST00000489241 F8W031 263 aaPredicted RBP5.99□□□□□ -1.45
XRN1-213ENST00000489241 FFAR3O14843 346 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 KCNQ2O43526 872 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 LTBRP36941 435 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 GABREP78334 506 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 FNDC3BQ53EP0 1204 aaKnown RBP5.99□□□□□ -1.45
XRN1-213ENST00000489241 MAMDC2Q7Z304 686 aaPredicted RBP5.99□□□□□ -1.45
XRN1-213ENST00000489241 SYT8Q8NBV8 401 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 PTPRN2Q92932 1015 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 C1orf159Q96HA4 380 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 ZFYVE21Q9BQ24 234 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 FAM126AQ9BYI3 521 aaPredicted RBP5.99□□□□□ -1.45
XRN1-213ENST00000489241 TMEFF2Q9UIK5 374 aaPredicted RBP5.99□□□□□ -1.45
XRN1-213ENST00000489241 PLA2G2DQ9UNK4 145 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 FAN1Q9Y2M0 1017 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 NPFFR2Q9Y5X5 522 aa5.99□□□□□ -1.45
XRN1-213ENST00000489241 ADAMTS20P59510 1910 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 C7orf72A4D263 438 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 AQP7O14520 342 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 NAT1P18440 290 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 STAT3P40763 770 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 VWA3BQ502W6 1294 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 ZDHHC14Q8IZN3 488 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 NETO2Q8NC67 525 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 CHAC2Q8WUX2 184 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 ALG3Q92685 438 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 TSPAN17Q96FV3 270 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 TEPSINQ96N21 525 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 MRPL4Q9BYD3 311 aaKnown RBP5.98□□□□□ -1.45
XRN1-213ENST00000489241 GPR27Q9NS67 375 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 TYW1Q9NV66 732 aaKnown RBP5.98□□□□□ -1.45
XRN1-213ENST00000489241 TIMM13Q9Y5L4 95 aaPredicted RBP5.98□□□□□ -1.45
XRN1-213ENST00000489241 PMF1-BGLAPU3KQ54 211 aa5.98□□□□□ -1.45
XRN1-213ENST00000489241 GSG1L2A8MUP6 293 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 PDE8AO60658 829 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 EFCAB14O75071 495 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 PLA2G1BP04054 148 aaKnown RBP5.97□□□□□ -1.45
XRN1-213ENST00000489241 NCAM1P13591 858 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms