RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 GPKOWQ92917 476 aaPredicted RBP eCLIP13.35□□□□□ -0.27
USP11-210ENST00000489030 MAP4K1Q92918 833 aa13.35□□□□□ -0.27
USP11-210ENST00000489030 TGS1Q96RS0 853 aaKnown RBP13.35□□□□□ -0.27
USP11-210ENST00000489030 RAD9AQ99638 391 aa13.35□□□□□ -0.27
USP11-210ENST00000489030 IL25Q9H293 177 aa13.35□□□□□ -0.27
USP11-210ENST00000489030 BCAS3Q9H6U6 928 aa13.35□□□□□ -0.27
USP11-210ENST00000489030 CTNNA3Q9UI47 895 aa13.35□□□□□ -0.27
USP11-210ENST00000489030 HCN4Q9Y3Q4 1203 aa13.35□□□□□ -0.27
USP11-210ENST00000489030 LAMA4Q16363 1823 aa13.34□□□□□ -0.27
USP11-210ENST00000489030 F2P00734 622 aa13.34□□□□□ -0.27
USP11-210ENST00000489030 KIAA0753Q2KHM9 967 aa13.34□□□□□ -0.27
USP11-210ENST00000489030 LEXMQ3ZCV2 418 aa13.34□□□□□ -0.27
USP11-210ENST00000489030 FAM178BQ8IXR5 827 aa13.34□□□□□ -0.27
USP11-210ENST00000489030 IL31RAQ8NI17 732 aa13.34□□□□□ -0.27
USP11-210ENST00000489030 RMDN3Q96TC7 470 aa13.34□□□□□ -0.27
USP11-210ENST00000489030 LSG1Q9H089 658 aaKnown RBP13.34□□□□□ -0.27
USP11-210ENST00000489030 UPF2Q9HAU5 1272 aaKnown RBP13.34□□□□□ -0.27
USP11-210ENST00000489030 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
USP11-210ENST00000489030 ABHD14A-ACY1A0A1B0GW23 586 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
USP11-210ENST00000489030 PPP1R11O60927 126 aaPredicted RBP13.33□□□□□ -0.28
USP11-210ENST00000489030 LGR5O75473 907 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 CASTP20810 708 aaKnown RBP13.33□□□□□ -0.28
USP11-210ENST00000489030 SP2Q02086 613 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 PTH1RQ03431 593 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 PTK7Q13308 1070 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 SLC35G1Q2M3R5 365 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 MFSD6Q6ZSS7 791 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 GJD3Q8N144 294 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 CCDC155Q8N6L0 562 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 C7orf31Q8N865 590 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 DBF4BQ8NFT6 615 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 NSUN6Q8TEA1 469 aaKnown RBP13.33□□□□□ -0.28
USP11-210ENST00000489030 TTC14Q96N46 770 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 USP26Q9BXU7 913 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 JMJD4Q9H9V9 463 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 VAT1LQ9HCJ6 419 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 LMCD1Q9NZU5 365 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 TELO2Q9Y4R8 837 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 ABCB11O95342 1321 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 ZMYM6O95789 1325 aa13.33□□□□□ -0.28
USP11-210ENST00000489030 SEC24BO95487 1268 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 NR3C2P08235 984 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 STXBP2Q15833 593 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 DGKDQ16760 1214 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 HSDL1Q3SXM5 330 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 PTCRAQ6ISU1 281 aaPredicted RBP13.32□□□□□ -0.28
USP11-210ENST00000489030 ALYREFQ86V81 257 aaKnown RBP13.32□□□□□ -0.28
USP11-210ENST00000489030 STAG2Q8N3U4 1231 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 FBXO22Q8NEZ5 403 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 PPTC7Q8NI37 304 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
USP11-210ENST00000489030 PXMP2Q9NR77 195 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
USP11-210ENST00000489030 SIP14410 1827 aa13.32□□□□□ -0.28
USP11-210ENST00000489030 KIAA1217Q5T5P2 1943 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 B4E1Z4 1266 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 ZNF213O14771 459 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 KDM4AO75164 1064 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
USP11-210ENST00000489030 HOXA13P31271 388 aaPredicted RBP13.31□□□□□ -0.28
USP11-210ENST00000489030 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
USP11-210ENST00000489030 IKBKEQ14164 716 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
USP11-210ENST00000489030 GPATCH4Q5T3I0 446 aaKnown RBP13.31□□□□□ -0.28
USP11-210ENST00000489030 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 MYOCDQ8IZQ8 938 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 ENAHQ8N8S7 591 aaPredicted RBP13.31□□□□□ -0.28
USP11-210ENST00000489030 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
USP11-210ENST00000489030 EMID1Q96A84 441 aaPredicted RBP13.31□□□□□ -0.28
USP11-210ENST00000489030 C16orf70Q9BSU1 422 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 PNMA2Q9UL42 364 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 RBM8AQ9Y5S9 174 aaKnown RBP13.31□□□□□ -0.28
USP11-210ENST00000489030 MRVI1Q9Y6F6 885 aa13.31□□□□□ -0.28
USP11-210ENST00000489030 GRXCR2A6NFK2 248 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 B4DLN1 442 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 EIF3JO75822 258 aaKnown RBP13.3□□□□□ -0.28
USP11-210ENST00000489030 CFBP00751 764 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 MYCLP12524 364 aaPredicted RBP13.3□□□□□ -0.28
USP11-210ENST00000489030 SSTR3P32745 418 aaPredicted RBP13.3□□□□□ -0.28
USP11-210ENST00000489030 THPOP40225 353 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 HSD17B4P51659 736 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 MRPL12P52815 198 aaKnown RBP13.3□□□□□ -0.28
USP11-210ENST00000489030 LAMC2Q13753 1193 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 NECTIN1Q15223 517 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 EPC2Q52LR7 807 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 TCEAL5Q5H9L2 206 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 CELF3Q5SZQ8 465 aaKnown RBP13.3□□□□□ -0.28
USP11-210ENST00000489030 MYSM1Q5VVJ2 828 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 SERINC5Q86VE9 423 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 FBXO11Q86XK2 927 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 DGKHQ86XP1 1220 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 DHX37Q8IY37 1157 aaKnown RBP13.3□□□□□ -0.28
USP11-210ENST00000489030 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 IWS1Q96ST2 819 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 PDCD2LQ9BRP1 358 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 MICAL3Q7RTP6 2002 aa13.3□□□□□ -0.28
USP11-210ENST00000489030 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms