RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 A0A1B0GUA9 196 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 PAK2Q13177 524 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 FMNL3Q8IVF7 1028 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 FUKQ8N0W3 1084 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 ARFGAP2Q8N6H7 521 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 SMCR8Q8TEV9 937 aaPredicted RBP15.68■□□□□ 0.1
RER1-207ENST00000488353 SGSM3Q96HU1 749 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 FAXDC2Q96IV6 333 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 GDF3Q9NR23 364 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 DDX20Q9UHI6 824 aaKnown RBP15.68■□□□□ 0.1
RER1-207ENST00000488353 CALRP27797 417 aaKnown RBP15.68■□□□□ 0.1
RER1-207ENST00000488353 KIF5BP33176 963 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 LONP1P36776 959 aaKnown RBP15.68■□□□□ 0.1
RER1-207ENST00000488353 ATP2B2Q01814 1243 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 INF2Q27J81 1249 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 NFRKBQ6P4R8 1299 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 CEP120Q8N960 986 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 PNMA1Q8ND90 353 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 TGFBRAP1Q8WUH2 860 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 IFIH1Q9BYX4 1025 aaKnown RBP15.68■□□□□ 0.1
RER1-207ENST00000488353 IL17RBQ9NRM6 502 aa15.68■□□□□ 0.1
RER1-207ENST00000488353 CCDC194A0A1B0GVG4 234 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 USP17L3A6NCW0 530 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 USP17L4A6NCW7 530 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 CALML3P27482 149 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 ITGB3BPQ13352 177 aaPredicted RBP15.67■□□□□ 0.1
RER1-207ENST00000488353 PPP2R5AQ15172 486 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 SLC27A3Q5K4L6 730 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 DTHD1Q6ZMT9 781 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 USP17L1Q7RTZ2 530 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 CYFIP2Q96F07 1278 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 RBM17Q96I25 401 aaKnown RBP15.67■□□□□ 0.1
RER1-207ENST00000488353 POLD4Q9HCU8 107 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 CD209Q9NNX6 404 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 DISC1Q9NRI5 854 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 GGA1Q9UJY5 639 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 NFU1Q9UMS0 254 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 PCDHA4Q9UN74 947 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 B4DLN1 442 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 POLRMTO00411 1230 aaKnown RBP15.67■□□□□ 0.1
RER1-207ENST00000488353 ZNF263O14978 683 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 CXCR5P32302 372 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 SLC8A1P32418 973 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 TBC1D8BQ0IIM8 1120 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 TXNRD1Q16881 649 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 NAALADL2Q58DX5 795 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 ARL6IP4Q66PJ3 421 aaKnown RBP15.67■□□□□ 0.1
RER1-207ENST00000488353 CCDC155Q8N6L0 562 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 SLC44A5Q8NCS7 719 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 NOC3LQ8WTT2 800 aaKnown RBP15.67■□□□□ 0.1
RER1-207ENST00000488353 TUBGCP2Q9BSJ2 902 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 RNF14Q9UBS8 474 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 POLLQ9UGP5 575 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 SAP30BPQ9UHR5 308 aaKnown RBP15.67■□□□□ 0.1
RER1-207ENST00000488353 PCDHA13Q9Y5I0 950 aa15.67■□□□□ 0.1
RER1-207ENST00000488353 MAST2Q6P0Q8 1798 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 A0A1W2PQJ5 194 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 MOCS3O95396 460 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 CARSP49589 748 aaKnown RBP15.66■□□□□ 0.1
RER1-207ENST00000488353 IFFO1Q0D2I5 559 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 SBK1Q52WX2 424 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 FIGNQ5HY92 759 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 HEATR3Q7Z4Q2 680 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 MAPKAPK5Q8IW41 473 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 PIK3R5Q8WYR1 880 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 TRIM47Q96LD4 638 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 CPVLQ9H3G5 476 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 RBM12Q9NTZ6 932 aaKnown RBP15.66■□□□□ 0.1
RER1-207ENST00000488353 BRWD3Q6RI45 1802 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 KIAA1551Q9HCM1 1747 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 RASSF10A6NK89 507 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 PSMA7O14818 248 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 NEBLO76041 1014 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 GLI1P08151 1106 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 UBA7P41226 1012 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 CFAP221Q4G0U5 840 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 FKBP15Q5T1M5 1219 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 C12orf60Q5U649 245 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 KRT26Q7Z3Y9 468 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 PCMTD1Q96MG8 357 aaPredicted RBP15.66■□□□□ 0.1
RER1-207ENST00000488353 MLXIPQ9HAP2 919 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 EPB41L5Q9HCM4 733 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 PPANQ9NQ55 473 aaKnown RBP15.66■□□□□ 0.1
RER1-207ENST00000488353 PCDHA6Q9UN73 950 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 PCDHA8Q9Y5H6 950 aa15.66■□□□□ 0.1
RER1-207ENST00000488353 GMNCA6NCL1 334 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 GOLGA6L10A6NI86 522 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 FAM153BP0C7A2 387 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 GOLGA8HP0CJ92 632 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 PDHBP11177 359 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 BRD2P25440 801 aaKnown RBP15.65■□□□□ 0.1
RER1-207ENST00000488353 FAM153CQ494X1 144 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 TAX1BP1Q86VP1 789 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 FAM228AQ86W67 206 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 WHAMMQ8TF30 809 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 IQCDQ96DY2 449 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 PSMB7Q99436 277 aa15.65■□□□□ 0.1
RER1-207ENST00000488353 TRIM6Q9C030 488 aaPredicted RBP15.65■□□□□ 0.1
RER1-207ENST00000488353 ATP6V0A4Q9HBG4 840 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms