RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 FSD2A1L4K1 749 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 TESPA1A2RU30 521 aaPredicted RBP7.78□□□□□ -1.16
PDAP1-203ENST00000488214 DDX39AO00148 427 aaKnown RBP7.78□□□□□ -1.16
PDAP1-203ENST00000488214 BIN1O00499 593 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 GAS7O60861 476 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 SLC25A27O95847 323 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 SLC10A3P09131 477 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 SLFN14P0C7P3 912 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 ERVK-9P63128 1117 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 ERVK-24P63145 666 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 GRM1Q13255 1194 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 MTMR1Q13613 665 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 L1TD1Q5T7N2 865 aaKnown RBP7.78□□□□□ -1.16
PDAP1-203ENST00000488214 LRCH2Q5VUJ6 765 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 HAUS3Q68CZ6 603 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 RGMBQ6NW40 437 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 KANK3Q6NY19 840 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 PDXDC2PQ6P474 469 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 SAPCD2Q86UD0 394 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 ANKRD13CQ8N6S4 541 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 ERMNQ8TAM6 284 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 NSUN6Q8TEA1 469 aaKnown RBP7.78□□□□□ -1.16
PDAP1-203ENST00000488214 SLC5A5Q92911 643 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 SMARCE1Q969G3 411 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 FAM20AQ96MK3 541 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 MXRA8Q9BRK3 442 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 MMTAG2Q9BU76 263 aaKnown RBP7.78□□□□□ -1.16
PDAP1-203ENST00000488214 TEKT3Q9BXF9 490 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 DNAJC25Q9H1X3 360 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 GRPEL1Q9HAV7 217 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 RBPJLQ9UBG7 517 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 USP25Q9UHP3 1055 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 VAV3Q9UKW4 847 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 PCDHA12Q9UN75 941 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 TLL2Q9Y6L7 1015 aa7.78□□□□□ -1.16
PDAP1-203ENST00000488214 MYH9P35579 1960 aaKnown RBP7.78□□□□□ -1.16
PDAP1-203ENST00000488214 POTEB3A0JP26 581 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 MANSC4A6NHS7 340 aaPredicted RBP7.77□□□□□ -1.17
PDAP1-203ENST00000488214 POTEB2H3BUK9 544 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 MEIS1O00470 390 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 SMC2O95347 1197 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 MYCNP04198 464 aaPredicted RBP7.77□□□□□ -1.17
PDAP1-203ENST00000488214 ATXN8OSP0DMR3 200 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 ARP10275 920 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 ITGB5P18084 799 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 CASP1P29466 404 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 DEKP35659 375 aaKnown RBP7.77□□□□□ -1.17
PDAP1-203ENST00000488214 ALDH5A1P51649 535 aaPredicted RBP7.77□□□□□ -1.17
PDAP1-203ENST00000488214 CCNA1P78396 465 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 MRPS9P82933 396 aaKnown RBP7.77□□□□□ -1.17
PDAP1-203ENST00000488214 CNTN2Q02246 1040 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 SPIRE1Q08AE8 756 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 GRB10Q13322 594 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 KCTD2Q14681 263 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 TMEM119Q4V9L6 283 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 POTEBQ6S5H4 581 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 C11orf57Q6ZUT1 292 aaPredicted RBP7.77□□□□□ -1.17
PDAP1-203ENST00000488214 NIPA1Q7RTP0 329 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 FAM200AQ8TCP9 573 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 STAMQ92783 540 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 PAGE5Q96GU1 130 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 PNMA5Q96PV4 448 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 MMP19Q99542 508 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 NUDT12Q9BQG2 462 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 WDR11Q9BZH6 1224 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 RBSNQ9H1K0 784 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 PORCNQ9H237 461 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 BLZF1Q9H2G9 400 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 R3HDMLQ9H3Y0 253 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 MROH8Q9H579 483 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 MAGEF1Q9HAY2 307 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 JADE2Q9NQC1 790 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 ANO10Q9NW15 660 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 KIAA1468Q9P260 1216 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 STK17AQ9UEE5 414 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 TCEAL9Q9UHQ7 104 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 UBIAD1Q9Y5Z9 338 aa7.77□□□□□ -1.17
PDAP1-203ENST00000488214 POTEFA5A3E0 1075 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 TMEM88BA6NKF7 163 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 IPO5O00410 1097 aaKnown RBP7.76□□□□□ -1.17
PDAP1-203ENST00000488214 IGF2BP3O00425 579 aaKnown RBP eCLIP7.76□□□□□ -1.17
PDAP1-203ENST00000488214 GTPBP6O43824 516 aaPredicted RBP7.76□□□□□ -1.17
PDAP1-203ENST00000488214 MED24O75448 989 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 PGK2P07205 417 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 NR3C2P08235 984 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 GCLCP48506 637 aaPredicted RBP7.76□□□□□ -1.17
PDAP1-203ENST00000488214 MRE11P49959 708 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 NLRP12P59046 1061 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 CYP4A11Q02928 519 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 PDE4DQ08499 809 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 ITGB3BPQ13352 177 aaPredicted RBP7.76□□□□□ -1.17
PDAP1-203ENST00000488214 PDIA5Q14554 519 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 DHX8Q14562 1220 aaKnown RBP7.76□□□□□ -1.17
PDAP1-203ENST00000488214 TAF1CQ15572 869 aaPredicted RBP7.76□□□□□ -1.17
PDAP1-203ENST00000488214 FAM110CQ1W6H9 321 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 Q3C1V9 767 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 DPCR1Q3MIW9 517 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 GNPTABQ3T906 1256 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 NAALADL2Q58DX5 795 aa7.76□□□□□ -1.17
PDAP1-203ENST00000488214 ISM2Q6H9L7 571 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms