RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 IQCF3P0C7M6 154 aa27.22■■□□□ 1.95
PLOD3-215ENST00000487563 LIFRP42702 1097 aa27.22■■□□□ 1.95
PLOD3-215ENST00000487563 KIAA0753Q2KHM9 967 aa27.22■■□□□ 1.95
PLOD3-215ENST00000487563 CAGE1Q8TC20 777 aa27.22■■□□□ 1.95
PLOD3-215ENST00000487563 GAS2L1Q99501 681 aaPredicted RBP27.22■■□□□ 1.95
PLOD3-215ENST00000487563 LRRC2Q9BYS8 371 aa27.22■■□□□ 1.95
PLOD3-215ENST00000487563 NKX2-4Q9H2Z4 354 aa27.22■■□□□ 1.95
PLOD3-215ENST00000487563 GTF2IRD1Q9UHL9 959 aa27.22■■□□□ 1.95
PLOD3-215ENST00000487563 MYH7BA7E2Y1 1941 aa27.22■■□□□ 1.95
PLOD3-215ENST00000487563 SCN5AQ14524 2016 aa27.21■■□□□ 1.95
PLOD3-215ENST00000487563 ATP2A2P16615 1042 aaKnown RBP27.21■■□□□ 1.95
PLOD3-215ENST00000487563 RAB11FIP4Q86YS3 637 aa27.21■■□□□ 1.95
PLOD3-215ENST00000487563 AFAP1L1Q8TED9 768 aa27.21■■□□□ 1.95
PLOD3-215ENST00000487563 VWCEQ96DN2 955 aa27.21■■□□□ 1.95
PLOD3-215ENST00000487563 SLC28A3Q9HAS3 691 aa27.21■■□□□ 1.95
PLOD3-215ENST00000487563 HDAC6Q9UBN7 1215 aa27.21■■□□□ 1.95
PLOD3-215ENST00000487563 FRMPD4Q14CM0 1322 aa27.2■■□□□ 1.95
PLOD3-215ENST00000487563 PPFIA4O75335 1185 aa27.2■■□□□ 1.94
PLOD3-215ENST00000487563 STAM2O75886 525 aa27.2■■□□□ 1.94
PLOD3-215ENST00000487563 HSDL1Q3SXM5 330 aa27.2■■□□□ 1.94
PLOD3-215ENST00000487563 CMTR1Q8N1G2 835 aaKnown RBP27.2■■□□□ 1.94
PLOD3-215ENST00000487563 SRBD1Q8N5C6 995 aaKnown RBP27.2■■□□□ 1.94
PLOD3-215ENST00000487563 RABGGTBP53611 331 aa27.19■■□□□ 1.94
PLOD3-215ENST00000487563 COL9A3Q14050 684 aaPredicted RBP27.19■■□□□ 1.94
PLOD3-215ENST00000487563 SYNE3Q6ZMZ3 975 aa27.19■■□□□ 1.94
PLOD3-215ENST00000487563 MICU3Q86XE3 530 aa27.19■■□□□ 1.94
PLOD3-215ENST00000487563 GPKOWQ92917 476 aaPredicted RBP eCLIP27.19■■□□□ 1.94
PLOD3-215ENST00000487563 PRDM12Q9H4Q4 367 aa27.19■■□□□ 1.94
PLOD3-215ENST00000487563 YBX2Q9Y2T7 364 aaKnown RBP27.19■■□□□ 1.94
PLOD3-215ENST00000487563 GBF1Q92538 1859 aa27.19■■□□□ 1.94
PLOD3-215ENST00000487563 CDH23Q9H251 3354 aa27.18■■□□□ 1.94
PLOD3-215ENST00000487563 NOP56O00567 594 aaKnown RBP27.18■■□□□ 1.94
PLOD3-215ENST00000487563 CDC45O75419 566 aa27.18■■□□□ 1.94
PLOD3-215ENST00000487563 HOXD8P13378 290 aaPredicted RBP27.18■■□□□ 1.94
PLOD3-215ENST00000487563 MRPS9P82933 396 aaKnown RBP27.18■■□□□ 1.94
PLOD3-215ENST00000487563 SP2Q02086 613 aa27.18■■□□□ 1.94
PLOD3-215ENST00000487563 USP17L6PQ6QN14 398 aa27.18■■□□□ 1.94
PLOD3-215ENST00000487563 RTEL1Q9NZ71 1219 aa27.18■■□□□ 1.94
PLOD3-215ENST00000487563 HAS3O00219 553 aa27.17■■□□□ 1.94
PLOD3-215ENST00000487563 FIBPO43427 364 aa27.17■■□□□ 1.94
PLOD3-215ENST00000487563 SELPP16109 830 aa27.17■■□□□ 1.94
PLOD3-215ENST00000487563 PPP2R2DQ66LE6 453 aa27.17■■□□□ 1.94
PLOD3-215ENST00000487563 LRRC8DQ7L1W4 858 aa27.17■■□□□ 1.94
PLOD3-215ENST00000487563 CCDC82Q8N4S0 544 aa27.17■■□□□ 1.94
PLOD3-215ENST00000487563 INPP4AQ96PE3 977 aaPredicted RBP27.17■■□□□ 1.94
PLOD3-215ENST00000487563 NEK1Q96PY6 1258 aa27.17■■□□□ 1.94
PLOD3-215ENST00000487563 CTAGE1Q96RT6 745 aa27.17■■□□□ 1.94
PLOD3-215ENST00000487563 PCDHA11Q9Y5I1 949 aa27.17■■□□□ 1.94
PLOD3-215ENST00000487563 PIK3CDO00329 1044 aa27.16■■□□□ 1.94
PLOD3-215ENST00000487563 NEDD9Q14511 834 aa27.16■■□□□ 1.94
PLOD3-215ENST00000487563 FANCBQ8NB91 859 aa27.16■■□□□ 1.94
PLOD3-215ENST00000487563 DHX38Q92620 1227 aaKnown RBP27.16■■□□□ 1.94
PLOD3-215ENST00000487563 SLC9A7Q96T83 725 aa27.16■■□□□ 1.94
PLOD3-215ENST00000487563 ICAM3P32942 547 aa27.15■■□□□ 1.94
PLOD3-215ENST00000487563 PTK7Q13308 1070 aa27.15■■□□□ 1.94
PLOD3-215ENST00000487563 PCNX4Q63HM2 1172 aa27.15■■□□□ 1.94
PLOD3-215ENST00000487563 XRRA1Q6P2D8 792 aa27.15■■□□□ 1.94
PLOD3-215ENST00000487563 TMTC3Q6ZXV5 915 aa27.15■■□□□ 1.94
PLOD3-215ENST00000487563 SGMS1Q86VZ5 419 aa27.15■■□□□ 1.94
PLOD3-215ENST00000487563 PSTPIP2Q9H939 334 aa27.15■■□□□ 1.94
PLOD3-215ENST00000487563 hCG_1642624A0A1W2PR95 340 aa27.14■■□□□ 1.94
PLOD3-215ENST00000487563 MEIS2O14770 477 aa27.14■■□□□ 1.94
PLOD3-215ENST00000487563 PARNO95453 639 aaKnown RBP27.14■■□□□ 1.94
PLOD3-215ENST00000487563 METTL7BQ6UX53 244 aa27.14■■□□□ 1.94
PLOD3-215ENST00000487563 HEATR3Q7Z4Q2 680 aa27.14■■□□□ 1.94
PLOD3-215ENST00000487563 NLRX1Q86UT6 975 aa27.14■■□□□ 1.94
PLOD3-215ENST00000487563 TRIP12Q14669 1992 aaPredicted RBP27.14■■□□□ 1.94
PLOD3-215ENST00000487563 SPATA31C2B4DYI2 1134 aa27.13■■□□□ 1.93
PLOD3-215ENST00000487563 BAIAP3O94812 1187 aa27.13■■□□□ 1.93
PLOD3-215ENST00000487563 LGALS2P05162 132 aa27.13■■□□□ 1.93
PLOD3-215ENST00000487563 CKBP12277 381 aa27.13■■□□□ 1.93
PLOD3-215ENST00000487563 MYOGP15173 224 aa27.13■■□□□ 1.93
PLOD3-215ENST00000487563 KCNJ6P48051 423 aa27.13■■□□□ 1.93
PLOD3-215ENST00000487563 RBL2Q08999 1139 aa27.13■■□□□ 1.93
PLOD3-215ENST00000487563 CYFIP1Q7L576 1253 aa27.13■■□□□ 1.93
PLOD3-215ENST00000487563 C16orf70Q9BSU1 422 aa27.13■■□□□ 1.93
PLOD3-215ENST00000487563 H3BRB1 525 aa27.12■■□□□ 1.93
PLOD3-215ENST00000487563 ZNF200P98182 395 aaPredicted RBP27.12■■□□□ 1.93
PLOD3-215ENST00000487563 KRT32Q14532 448 aa27.12■■□□□ 1.93
PLOD3-215ENST00000487563 APOA5Q6Q788 366 aa27.12■■□□□ 1.93
PLOD3-215ENST00000487563 PHOSPHO2Q8TCD6 241 aa27.12■■□□□ 1.93
PLOD3-215ENST00000487563 TCEANC2Q96MN5 208 aa27.12■■□□□ 1.93
PLOD3-215ENST00000487563 TUT1Q9H6E5 874 aaKnown RBP27.12■■□□□ 1.93
PLOD3-215ENST00000487563 BCAS3Q9H6U6 928 aa27.12■■□□□ 1.93
PLOD3-215ENST00000487563 RBM28Q9NW13 759 aaKnown RBP27.12■■□□□ 1.93
PLOD3-215ENST00000487563 A0A0C4DFX4 3053 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 SPDYE3A6NKU9 549 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 IGFBP4P22692 258 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 SP4Q02446 784 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 SEMA3FQ13275 785 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 UBE2SQ16763 222 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 DHX32Q7L7V1 743 aaKnown RBP27.11■■□□□ 1.93
PLOD3-215ENST00000487563 PPM1EQ8WY54 764 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 CCDC136Q96JN2 1154 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 USP26Q9BXU7 913 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 UNC80Q8N2C7 3258 aa27.11■■□□□ 1.93
PLOD3-215ENST00000487563 EYSQ5T1H1 3165 aa27.1■■□□□ 1.93
PLOD3-215ENST00000487563 C17orf102A2RUQ5 167 aa27.1■■□□□ 1.93
PLOD3-215ENST00000487563 KIF28PB7ZC32 967 aa27.1■■□□□ 1.93
PLOD3-215ENST00000487563 RTN1Q16799 776 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms