RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 SERPINB2P05120 415 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 PLCG1P19174 1290 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 GARTP22102 1010 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 CYP7A1P22680 504 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 EPS15P42566 896 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 CRKLP46109 303 aaKnown RBP6.15□□□□□ -1.42
CNN3-206ENST00000487539 YARSP54577 528 aaKnown RBP6.15□□□□□ -1.42
CNN3-206ENST00000487539 TMEM201Q5SNT2 666 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 FBXL19Q6PCT2 694 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 MCATQ8IVS2 390 aaKnown RBP6.15□□□□□ -1.42
CNN3-206ENST00000487539 SPACA3Q8IXA5 215 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 RNF34Q969K3 372 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 COX4I2Q96KJ9 171 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 LRRC3Q9BY71 257 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 TAOK3Q9H2K8 898 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 ZNF277Q9NRM2 450 aaPredicted RBP6.15□□□□□ -1.42
CNN3-206ENST00000487539 RNF186Q9NXI6 227 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 TJP2Q9UDY2 1190 aa6.15□□□□□ -1.42
CNN3-206ENST00000487539 TPX2Q9ULW0 747 aaKnown RBP6.15□□□□□ -1.42
CNN3-206ENST00000487539 COL5A3P25940 1745 aaPredicted RBP6.15□□□□□ -1.42
CNN3-206ENST00000487539 CEP290O15078 2479 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 ANKRD31Q8N7Z5 1873 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 H0YIN7 160 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 GREM1O60565 184 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 SLITRK5O94991 958 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 CELF2O95319 508 aaKnown RBP6.14□□□□□ -1.43
CNN3-206ENST00000487539 EOMESO95936 686 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 FANCCQ00597 558 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 HSP90AB2PQ58FF8 381 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 LETMD1Q6P1Q0 360 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 CTU1Q7Z7A3 348 aaKnown RBP6.14□□□□□ -1.43
CNN3-206ENST00000487539 ZNF296Q8WUU4 475 aaPredicted RBP6.14□□□□□ -1.43
CNN3-206ENST00000487539 ACSF2Q96CM8 615 aaPredicted RBP6.14□□□□□ -1.43
CNN3-206ENST00000487539 MRRFQ96E11 262 aaKnown RBP6.14□□□□□ -1.43
CNN3-206ENST00000487539 SLC12A5Q9H2X9 1139 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 CGNL1Q0VF96 1302 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 EVC2Q86UK5 1308 aa6.14□□□□□ -1.43
CNN3-206ENST00000487539 SCN11AQ9UI33 1791 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 TRIM13O60858 407 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 RECKO95980 971 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 NKPD1Q17RQ9 610 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 SFRP5Q5T4F7 317 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 FAM214BQ7L5A3 538 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 USP48Q86UV5 1035 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 PNMA8AQ86V59 439 aaPredicted RBP6.13□□□□□ -1.43
CNN3-206ENST00000487539 ABHD4Q8TB40 342 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 BAHD1Q8TBE0 780 aaPredicted RBP6.13□□□□□ -1.43
CNN3-206ENST00000487539 GLIS2Q9BZE0 524 aaPredicted RBP6.13□□□□□ -1.43
CNN3-206ENST00000487539 ADAMTS1Q9UHI8 967 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 CORINQ9Y5Q5 1042 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 LTBP3Q9NS15 1303 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 COL11A2P13942 1736 aaPredicted RBP6.13□□□□□ -1.43
CNN3-206ENST00000487539 NRXN2Q9P2S2 1712 aa6.13□□□□□ -1.43
CNN3-206ENST00000487539 FAM155AB1AL88 458 aaPredicted RBP6.12□□□□□ -1.43
CNN3-206ENST00000487539 TLR3O15455 904 aaKnown RBP6.12□□□□□ -1.43
CNN3-206ENST00000487539 HTR3BO95264 441 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 INSRRP14616 1297 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 ETV3P41162 512 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 KIF23Q02241 960 aaPredicted RBP6.12□□□□□ -1.43
CNN3-206ENST00000487539 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 C22orf34Q6ZV56 151 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 KIAA0825Q8IV33 1275 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 SLFN12Q8IYM2 578 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 FAM13CQ8NE31 585 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 FBXO27Q8NI29 283 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 XAGE3Q8WTP9 111 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 DPH2Q9BQC3 489 aaPredicted RBP6.12□□□□□ -1.43
CNN3-206ENST00000487539 SPON2Q9BUD6 331 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 NT5C1AQ9BXI3 368 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 XYLT2Q9H1B5 865 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 ZNF408Q9H9D4 720 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 REV1Q9UBZ9 1251 aa6.12□□□□□ -1.43
CNN3-206ENST00000487539 POLR3KQ9Y2Y1 108 aaPredicted RBP6.12□□□□□ -1.43
CNN3-206ENST00000487539 KIAA0100Q14667 2235 aaKnown RBP6.11□□□□□ -1.43
CNN3-206ENST00000487539 COL4A5P29400 1685 aa6.11□□□□□ -1.43
CNN3-206ENST00000487539 OVOL3O00110 214 aa6.11□□□□□ -1.43
CNN3-206ENST00000487539 FZD9O00144 591 aa6.11□□□□□ -1.43
CNN3-206ENST00000487539 SRFP11831 508 aa6.11□□□□□ -1.43
CNN3-206ENST00000487539 PHKG2P15735 406 aa6.11□□□□□ -1.43
CNN3-206ENST00000487539 KIR3DL1P43629 444 aa6.11□□□□□ -1.43
CNN3-206ENST00000487539 CLCN7P51798 805 aa6.11□□□□□ -1.43
CNN3-206ENST00000487539 TCERG1LQ5VWI1 586 aa6.11□□□□□ -1.43
CNN3-206ENST00000487539 CYB5D2Q8WUJ1 264 aa6.11□□□□□ -1.43
CNN3-206ENST00000487539 OTOL1A6NHN0 477 aaPredicted RBP6.1□□□□□ -1.43
CNN3-206ENST00000487539 ATE1O95260 518 aa6.1□□□□□ -1.43
CNN3-206ENST00000487539 ZNF165P49910 485 aa6.1□□□□□ -1.43
CNN3-206ENST00000487539 PUM1Q14671 1186 aaKnown RBP eCLIP6.1□□□□□ -1.43
CNN3-206ENST00000487539 REXO1Q8N1G1 1221 aaKnown RBP6.1□□□□□ -1.43
CNN3-206ENST00000487539 MFSD4AQ8N468 514 aa6.1□□□□□ -1.43
CNN3-206ENST00000487539 BRMS1Q9HCU9 246 aa6.1□□□□□ -1.43
CNN3-206ENST00000487539 UBP1Q9NZI7 540 aa6.1□□□□□ -1.43
CNN3-206ENST00000487539 PCDHB14Q9Y5E9 798 aa6.1□□□□□ -1.43
CNN3-206ENST00000487539 BRCA2P51587 3418 aa6.09□□□□□ -1.43
CNN3-206ENST00000487539 INSRP06213 1382 aa6.09□□□□□ -1.43
CNN3-206ENST00000487539 SOS1Q07889 1333 aaPredicted RBP6.09□□□□□ -1.43
CNN3-206ENST00000487539 H0YGN5 161 aa6.09□□□□□ -1.43
CNN3-206ENST00000487539 EN2P19622 333 aaPredicted RBP6.09□□□□□ -1.43
CNN3-206ENST00000487539 CRKP46108 304 aa6.09□□□□□ -1.43
CNN3-206ENST00000487539 DLG4P78352 724 aa6.09□□□□□ -1.43
CNN3-206ENST00000487539 NOGQ13253 232 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms