RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 B4DLN1 442 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 SNAI1O95863 264 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-216ENST00000487485 CLK2P49760 499 aaKnown RBP12.22□□□□□ -0.45
TOP3B-216ENST00000487485 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 TRIM29Q14134 588 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
TOP3B-216ENST00000487485 JAKMIP3Q5VZ66 844 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 GALNT17Q6IS24 598 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 ARMCX2Q7L311 632 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 RNF180Q86T96 592 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 BLIDQ8IZY5 108 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 LENG1Q96BZ8 264 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-216ENST00000487485 TIFAQ96CG3 184 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
TOP3B-216ENST00000487485 C8orf76Q96K31 380 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 IWS1Q96ST2 819 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 MPHOSPH6Q99547 160 aaKnown RBP12.22□□□□□ -0.45
TOP3B-216ENST00000487485 PXMP2Q9NR77 195 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 TMEM260Q9NX78 707 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 PCDHA4Q9UN74 947 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 KIF3AQ9Y496 699 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
TOP3B-216ENST00000487485 MYH7BA7E2Y1 1941 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 LRRC37A2A6NM11 1700 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 GRXCR1A8MXD5 290 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 FOSP01100 380 aaPredicted RBP12.21□□□□□ -0.45
TOP3B-216ENST00000487485 NR3C2P08235 984 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 EIF2AK2P19525 551 aaKnown RBP12.21□□□□□ -0.45
TOP3B-216ENST00000487485 PGM5Q15124 567 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 NPY5RQ15761 445 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 KRT40Q6A162 431 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 C16orf59Q7L2K0 433 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 REXO1Q8N1G1 1221 aaKnown RBP12.21□□□□□ -0.45
TOP3B-216ENST00000487485 DAGLBQ8NCG7 672 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 MORC4Q8TE76 937 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.21□□□□□ -0.455e-12■□□□□ 10.8
TOP3B-216ENST00000487485 PDCD2LQ9BRP1 358 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.45
TOP3B-216ENST00000487485 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.21□□□□□ -0.45
TOP3B-216ENST00000487485 MMP1P03956 469 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 HSP90AA1P07900 732 aaKnown RBP12.2□□□□□ -0.46
TOP3B-216ENST00000487485 ZNF865P0CJ78 1059 aaPredicted RBP12.2□□□□□ -0.46
TOP3B-216ENST00000487485 MYCLP12524 364 aaPredicted RBP12.2□□□□□ -0.46
TOP3B-216ENST00000487485 EDNRBP24530 442 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 PBX2P40425 430 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 GUCY1B3Q02153 619 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 PDE4DQ08499 809 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 AP3B2Q13367 1082 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 STXBP2Q15833 593 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 MCTP2Q6DN12 878 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 ANKRD33Q7Z3H0 272 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 FBXO18Q8NFZ0 1043 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 RASGRP4Q8TDF6 673 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 PGBD1Q96JS3 809 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 TOX2Q96NM4 488 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 ANO3Q9BYT9 981 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 ABHD16BQ9H3Z7 469 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 EHMT1Q9H9B1 1298 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 NRBP1Q9UHY1 535 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 CNPY2Q9Y2B0 182 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 CHD7Q9P2D1 2997 aa12.2□□□□□ -0.46
TOP3B-216ENST00000487485 FRMPD4Q14CM0 1322 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 DCDC2CA8MYV0 355 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 M0R2N6 131 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 ADAMTS4O75173 837 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 TIMP1P01033 207 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 CCND2P30279 289 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 KRT2P35908 639 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 ACLYP53396 1101 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 ACVR2BQ13705 512 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 BECN1Q14457 450 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 LARP1BQ659C4 914 aaKnown RBP12.19□□□□□ -0.46
TOP3B-216ENST00000487485 EEPD1Q7L9B9 569 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 VSIG10LQ86VR7 867 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 IL31RAQ8NI17 732 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 ATXN2LQ8WWM7 1075 aaKnown RBP12.19□□□□□ -0.46
TOP3B-216ENST00000487485 ASB2Q96Q27 587 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 PBX4Q9BYU1 374 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 KATNBL1Q9H079 304 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 PRDM12Q9H4Q4 367 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 BRMS1Q9HCU9 246 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 STARD7Q9NQZ5 370 aa12.19□□□□□ -0.46
TOP3B-216ENST00000487485 TCF20Q9UGU0 1960 aaKnown RBP12.19□□□□□ -0.46
TOP3B-216ENST00000487485 BTBD18B2RXH4 712 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 EIF3JO75822 258 aaKnown RBP12.18□□□□□ -0.46
TOP3B-216ENST00000487485 AKR1A1P14550 325 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-216ENST00000487485 MRPS9P82933 396 aaKnown RBP12.18□□□□□ -0.46
TOP3B-216ENST00000487485 ADGRE1Q14246 886 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 SAFBQ15424 915 aaKnown RBP eCLIP12.18□□□□□ -0.46
TOP3B-216ENST00000487485 CCDC85BQ15834 202 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-216ENST00000487485 KCNA10Q16322 511 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 TMEM240Q5SV17 173 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 PCNX4Q63HM2 1172 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 DIS3L2Q8IYB7 885 aaKnown RBP12.18□□□□□ -0.46
TOP3B-216ENST00000487485 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 KLHDC9Q8NEP7 349 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-216ENST00000487485 GAS2L1Q99501 681 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms