RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 METTL7BQ6UX53 244 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 DHX37Q8IY37 1157 aaKnown RBP11.79□□□□□ -0.52
RNF220-215ENST00000487332 GPKOWQ92917 476 aaPredicted RBP eCLIP11.79□□□□□ -0.52
RNF220-215ENST00000487332 BADQ92934 168 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 VTI1AQ96AJ9 217 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 SPATA31C2B4DYI2 1134 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 HAS3O00219 553 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 MAFGO15525 162 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 ITGB8P26012 769 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 PDIA3P30101 505 aaKnown RBP11.78□□□□□ -0.52
RNF220-215ENST00000487332 ADD1P35611 737 aaKnown RBP11.78□□□□□ -0.52
RNF220-215ENST00000487332 ADCY7P51828 1080 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 FPGSQ05932 587 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 PPIGQ13427 754 aaKnown RBP eCLIP11.78□□□□□ -0.52
RNF220-215ENST00000487332 TYW1BQ6NUM6 668 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 NLRX1Q86UT6 975 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 CCDC82Q8N4S0 544 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 GIMAP8Q8ND71 665 aaPredicted RBP11.78□□□□□ -0.52
RNF220-215ENST00000487332 AFG1LQ8WV93 481 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 ZMYND12Q9H0C1 365 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 PCDHA6Q9UN73 950 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 PCDHA8Q9Y5H6 950 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 UBIAD1Q9Y5Z9 338 aa11.78□□□□□ -0.52
RNF220-215ENST00000487332 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
RNF220-215ENST00000487332 hCG_1642624A0A1W2PR95 340 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 B4GALT4O60513 344 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 PPFIA4O75335 1185 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 GGPS1O95749 300 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 SREBF1P36956 1147 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 PSMC6P62333 389 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 RBL2Q08999 1139 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 SEMA3FQ13275 785 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 PKN1Q16512 942 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 UBE2SQ16763 222 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 CCDC148Q8NFR7 591 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 KAT2BQ92831 832 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 SPATA33Q96N06 139 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 ANO3Q9BYT9 981 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 HIPK3Q9H422 1215 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 SH3GLB2Q9NR46 395 aa11.77□□□□□ -0.53
RNF220-215ENST00000487332 TANC1Q9C0D5 1861 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 SMCO2A6NFE2 343 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 PFKMP08237 780 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 GNA11P29992 359 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 HOXC8P31273 242 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 SP2Q02086 613 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 ANKRD1Q15327 319 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 HSDL1Q3SXM5 330 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 PSRC1Q6PGN9 363 aaPredicted RBP11.76□□□□□ -0.53
RNF220-215ENST00000487332 NIPA1Q7RTP0 329 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 TMEM199Q8N511 208 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 NOC4LQ9BVI4 516 aaKnown RBP11.76□□□□□ -0.53
RNF220-215ENST00000487332 UPF3BQ9BZI7 483 aaKnown RBP11.76□□□□□ -0.53
RNF220-215ENST00000487332 JADE2Q9NQC1 790 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 PDRG1Q9NUG6 133 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 NAP1L2Q9ULW6 460 aaPredicted RBP11.76□□□□□ -0.53
RNF220-215ENST00000487332 DNAH12Q6ZR08 3092 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 STK36Q9NRP7 1315 aa11.76□□□□□ -0.53
RNF220-215ENST00000487332 KCNA2P16389 499 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 ITGB5P18084 799 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 RFC2P35250 354 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 PSEN2P49810 448 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 AKAP17AQ02040 695 aaKnown RBP11.75□□□□□ -0.53
RNF220-215ENST00000487332 MTMR1Q13613 665 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 CPLX2Q6PUV4 134 aaKnown RBP11.75□□□□□ -0.53
RNF220-215ENST00000487332 TRIM22Q8IYM9 498 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 CCDC155Q8N6L0 562 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 CAGE1Q8TC20 777 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 BICD2Q8TD16 824 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 CRYGNQ8WXF5 182 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 MLXIPQ9HAP2 919 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 C6orf50Q9HD87 102 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 GTF2IRD1Q9UHL9 959 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 NFASCO94856 1347 aa11.75□□□□□ -0.53
RNF220-215ENST00000487332 SOX1O00570 391 aaPredicted RBP11.74□□□□□ -0.53
RNF220-215ENST00000487332 CDKL5O76039 1030 aa11.74□□□□□ -0.53
RNF220-215ENST00000487332 DEXIO95424 95 aa11.74□□□□□ -0.53
RNF220-215ENST00000487332 PARNO95453 639 aaKnown RBP11.74□□□□□ -0.53
RNF220-215ENST00000487332 CYP3A4P08684 503 aa11.74□□□□□ -0.53
RNF220-215ENST00000487332 SMAD3P84022 425 aaKnown RBP11.74□□□□□ -0.53
RNF220-215ENST00000487332 MFSD10Q14728 455 aa11.74□□□□□ -0.53
RNF220-215ENST00000487332 RASIP1Q5U651 963 aa11.74□□□□□ -0.53
RNF220-215ENST00000487332 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
RNF220-215ENST00000487332 GPR20Q99678 358 aa11.74□□□□□ -0.53
RNF220-215ENST00000487332 MXRA8Q9BRK3 442 aa11.74□□□□□ -0.53
RNF220-215ENST00000487332 C16orf70Q9BSU1 422 aa11.74□□□□□ -0.53
RNF220-215ENST00000487332 TRPV6Q9H1D0 765 aa11.74□□□□□ -0.53
RNF220-215ENST00000487332 ZNF215Q9UL58 517 aaPredicted RBP11.74□□□□□ -0.53
RNF220-215ENST00000487332 TMEM265A0A087WTH1 108 aa11.73□□□□□ -0.53
RNF220-215ENST00000487332 NOP56O00567 594 aaKnown RBP11.73□□□□□ -0.53
RNF220-215ENST00000487332 CPLX1O14810 134 aa11.73□□□□□ -0.53
RNF220-215ENST00000487332 PFKFB2O60825 505 aa11.73□□□□□ -0.53
RNF220-215ENST00000487332 LGALS2P05162 132 aa11.73□□□□□ -0.53
RNF220-215ENST00000487332 ZNF286BP0CG31 522 aa11.73□□□□□ -0.53
RNF220-215ENST00000487332 EPHB4P54760 987 aa11.73□□□□□ -0.53
RNF220-215ENST00000487332 SETQ01105 290 aaPredicted RBP11.73□□□□□ -0.53
RNF220-215ENST00000487332 SSRP1Q08945 709 aaKnown RBP11.73□□□□□ -0.53
RNF220-215ENST00000487332 BFSP2Q13515 415 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms