RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 GHRHRQ02643 423 aa22.66■■□□□ 1.22
SMPDL3A-202ENST00000487215 HIC1Q14526 733 aa22.66■■□□□ 1.22
SMPDL3A-202ENST00000487215 TMEM31Q5JXX7 168 aa22.66■■□□□ 1.22
SMPDL3A-202ENST00000487215 ZSWIM5Q9P217 1185 aa22.66■■□□□ 1.22
SMPDL3A-202ENST00000487215 LGR5O75473 907 aa22.65■■□□□ 1.22
SMPDL3A-202ENST00000487215 RGS20O76081 388 aa22.65■■□□□ 1.22
SMPDL3A-202ENST00000487215 CWC27Q6UX04 472 aaKnown RBP22.65■■□□□ 1.22
SMPDL3A-202ENST00000487215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.65■■□□□ 1.22
SMPDL3A-202ENST00000487215 PDCD2LQ9BRP1 358 aa22.65■■□□□ 1.22
SMPDL3A-202ENST00000487215 AMNQ9BXJ7 453 aa22.65■■□□□ 1.22
SMPDL3A-202ENST00000487215 UBE2ZQ9H832 354 aaPredicted RBP22.65■■□□□ 1.22
SMPDL3A-202ENST00000487215 SORBS3O60504 671 aa22.64■■□□□ 1.21
SMPDL3A-202ENST00000487215 HSDL1Q3SXM5 330 aa22.64■■□□□ 1.21
SMPDL3A-202ENST00000487215 MYSM1Q5VVJ2 828 aa22.64■■□□□ 1.21
SMPDL3A-202ENST00000487215 STAG2Q8N3U4 1231 aa22.64■■□□□ 1.21
SMPDL3A-202ENST00000487215 CD320Q9NPF0 282 aa22.64■■□□□ 1.21
SMPDL3A-202ENST00000487215 C11orf16Q9NQ32 467 aa22.64■■□□□ 1.21
SMPDL3A-202ENST00000487215 HCN4Q9Y3Q4 1203 aa22.64■■□□□ 1.21
SMPDL3A-202ENST00000487215 SIP14410 1827 aa22.64■■□□□ 1.21
SMPDL3A-202ENST00000487215 PPP1R11O60927 126 aaPredicted RBP22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 PPFIA4O75335 1185 aa22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 GGPS1O95749 300 aa22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 MYCLP12524 364 aaPredicted RBP22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 MKRN4PQ13434 485 aaPredicted RBP22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 CELF3Q5SZQ8 465 aaKnown RBP22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 SPATA33Q96N06 139 aa22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 C17orf80Q9BSJ5 609 aa22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 DIAPH3Q9NSV4 1193 aa22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 ARIH1Q9Y4X5 557 aaPredicted RBP22.63■■□□□ 1.21
SMPDL3A-202ENST00000487215 EMSYQ7Z589 1322 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 HOXD11P31277 338 aaPredicted RBP22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 IMMTQ16891 758 aaKnown RBP22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 KCNV1Q6PIU1 500 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 STOX1Q6ZVD7 989 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 SERINC5Q86VE9 423 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 DBF4BQ8NFT6 615 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 IL31RAQ8NI17 732 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 MTMR8Q96EF0 704 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 UBAC1Q9BSL1 405 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 DSCC1Q9BVC3 393 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 INSL6Q9Y581 213 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 MYH6P13533 1939 aa22.62■■□□□ 1.21
SMPDL3A-202ENST00000487215 FAM86C2PA6NEL3 165 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 RSPH10B2B2RC85 870 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 GPR37L1O60883 481 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 AMHP03971 560 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 RSPH10BP0C881 870 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 UBA1P22314 1058 aaKnown RBP22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 HOXA13P31271 388 aaPredicted RBP22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 THPOP40225 353 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 SP2Q02086 613 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 PGM5Q15124 567 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 IFIT1BQ5T764 474 aaKnown RBP22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 B4GALNT3Q6L9W6 998 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 VSIG10LQ86VR7 867 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 PLEKHM2Q8IWE5 1019 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 SMC5Q8IY18 1101 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 MYOCDQ8IZQ8 938 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 FBXO22Q8NEZ5 403 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 C16orf70Q9BSU1 422 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 KRT23Q9C075 422 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 OSBPL3Q9H4L5 887 aa22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 MAP3K20Q9NYL2 800 aaKnown RBP22.61■■□□□ 1.21
SMPDL3A-202ENST00000487215 KLRF2D3W0D1 207 aa22.6■■□□□ 1.21
SMPDL3A-202ENST00000487215 PI4K2BG5E9Z4 385 aa22.6■■□□□ 1.21
SMPDL3A-202ENST00000487215 ZBTB5O15062 677 aa22.6■■□□□ 1.21
SMPDL3A-202ENST00000487215 KCNA5P22460 613 aa22.6■■□□□ 1.21
SMPDL3A-202ENST00000487215 HTRA4P83105 476 aaPredicted RBP22.6■■□□□ 1.21
SMPDL3A-202ENST00000487215 LEXMQ3ZCV2 418 aa22.6■■□□□ 1.21
SMPDL3A-202ENST00000487215 SP7Q8TDD2 431 aaPredicted RBP22.6■■□□□ 1.21
SMPDL3A-202ENST00000487215 GPKOWQ92917 476 aaPredicted RBP eCLIP22.6■■□□□ 1.21
SMPDL3A-202ENST00000487215 PCDHA1Q9Y5I3 950 aa22.6■■□□□ 1.21
SMPDL3A-202ENST00000487215 C17orf102A2RUQ5 167 aa22.59■■□□□ 1.21
SMPDL3A-202ENST00000487215 PLEKHG4Q58EX7 1191 aa22.59■■□□□ 1.21
SMPDL3A-202ENST00000487215 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.59■■□□□ 1.21
SMPDL3A-202ENST00000487215 ZFP91Q96JP5 570 aaPredicted RBP22.59■■□□□ 1.21
SMPDL3A-202ENST00000487215 CNNM2Q9H8M5 875 aa22.59■■□□□ 1.21
SMPDL3A-202ENST00000487215 CTNNA3Q9UI47 895 aa22.59■■□□□ 1.21
SMPDL3A-202ENST00000487215 MAD2L2Q9UI95 211 aa22.59■■□□□ 1.21
SMPDL3A-202ENST00000487215 MYH7BA7E2Y1 1941 aa22.59■■□□□ 1.21
SMPDL3A-202ENST00000487215 HIP1O00291 1037 aa22.58■■□□□ 1.21
SMPDL3A-202ENST00000487215 TGFB3P10600 412 aa22.58■■□□□ 1.21
SMPDL3A-202ENST00000487215 HOXC8P31273 242 aa22.58■■□□□ 1.21
SMPDL3A-202ENST00000487215 SEC23AQ15436 765 aa22.58■■□□□ 1.21
SMPDL3A-202ENST00000487215 CHD1LQ86WJ1 897 aa22.58■■□□□ 1.21
SMPDL3A-202ENST00000487215 FAM178BQ8IXR5 827 aa22.58■■□□□ 1.21
SMPDL3A-202ENST00000487215 SAMD3Q8N6K7 520 aa22.58■■□□□ 1.21
SMPDL3A-202ENST00000487215 ATP6V0A1Q93050 837 aa22.58■■□□□ 1.21
SMPDL3A-202ENST00000487215 MLXIPQ9HAP2 919 aa22.58■■□□□ 1.21
SMPDL3A-202ENST00000487215 PALM3A6NDB9 673 aaPredicted RBP22.57■■□□□ 1.2
SMPDL3A-202ENST00000487215 H3BRB1 525 aa22.57■■□□□ 1.2
SMPDL3A-202ENST00000487215 IL9P15248 144 aa22.57■■□□□ 1.2
SMPDL3A-202ENST00000487215 CCND2P30279 289 aa22.57■■□□□ 1.2
SMPDL3A-202ENST00000487215 SLC35G1Q2M3R5 365 aa22.57■■□□□ 1.2
SMPDL3A-202ENST00000487215 HOMER1Q86YM7 354 aa22.57■■□□□ 1.2
SMPDL3A-202ENST00000487215 GJD3Q8N144 294 aa22.57■■□□□ 1.2
SMPDL3A-202ENST00000487215 MRPL38Q96DV4 380 aaKnown RBP22.57■■□□□ 1.2
SMPDL3A-202ENST00000487215 TUT1Q9H6E5 874 aaKnown RBP22.57■■□□□ 1.2
SMPDL3A-202ENST00000487215 MICAL3Q7RTP6 2002 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms