RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 DGKDQ16760 1214 aa25.68■■□□□ 1.7
CDHR3-212ENST00000487084 NBPF20Q3BBV1 942 aa25.68■■□□□ 1.7
CDHR3-212ENST00000487084 CELF3Q5SZQ8 465 aaKnown RBP25.68■■□□□ 1.7
CDHR3-212ENST00000487084 XRRA1Q6P2D8 792 aa25.68■■□□□ 1.7
CDHR3-212ENST00000487084 PPTC7Q8NI37 304 aa25.68■■□□□ 1.7
CDHR3-212ENST00000487084 SPATA33Q96N06 139 aa25.68■■□□□ 1.7
CDHR3-212ENST00000487084 SLC26A6Q9BXS9 759 aa25.68■■□□□ 1.7
CDHR3-212ENST00000487084 PPP1R12CQ9BZL4 782 aa25.68■■□□□ 1.7
CDHR3-212ENST00000487084 TRPV6Q9H1D0 765 aa25.68■■□□□ 1.7
CDHR3-212ENST00000487084 MLXIPQ9HAP2 919 aa25.68■■□□□ 1.7
CDHR3-212ENST00000487084 B4GALT4O60513 344 aa25.67■■□□□ 1.7
CDHR3-212ENST00000487084 CD4P01730 458 aa25.67■■□□□ 1.7
CDHR3-212ENST00000487084 ANAPC15P60006 121 aa25.67■■□□□ 1.7
CDHR3-212ENST00000487084 NLRX1Q86UT6 975 aa25.67■■□□□ 1.7
CDHR3-212ENST00000487084 PGBD1Q96JS3 809 aa25.67■■□□□ 1.7
CDHR3-212ENST00000487084 ALDH8A1Q9H2A2 487 aaPredicted RBP25.67■■□□□ 1.7
CDHR3-212ENST00000487084 CPLX1O14810 134 aa25.66■■□□□ 1.7
CDHR3-212ENST00000487084 PRPF3O43395 683 aaKnown RBP25.66■■□□□ 1.7
CDHR3-212ENST00000487084 FIBPO43427 364 aa25.66■■□□□ 1.7
CDHR3-212ENST00000487084 TIMP1P01033 207 aa25.66■■□□□ 1.7
CDHR3-212ENST00000487084 MYSM1Q5VVJ2 828 aa25.66■■□□□ 1.7
CDHR3-212ENST00000487084 TRMT13Q9NUP7 481 aaKnown RBP25.66■■□□□ 1.7
CDHR3-212ENST00000487084 SEC24BO95487 1268 aa25.65■■□□□ 1.7
CDHR3-212ENST00000487084 ZNF286BP0CG31 522 aa25.65■■□□□ 1.7
CDHR3-212ENST00000487084 IFNAR1P17181 557 aa25.65■■□□□ 1.7
CDHR3-212ENST00000487084 ICAM3P32942 547 aa25.65■■□□□ 1.7
CDHR3-212ENST00000487084 FPGSQ05932 587 aa25.65■■□□□ 1.7
CDHR3-212ENST00000487084 SEMA3FQ13275 785 aa25.65■■□□□ 1.7
CDHR3-212ENST00000487084 NTRK3Q16288 839 aa25.65■■□□□ 1.7
CDHR3-212ENST00000487084 ZNF274Q96GC6 653 aaPredicted RBP25.65■■□□□ 1.7
CDHR3-212ENST00000487084 RNF26Q9BY78 433 aaPredicted RBP25.65■■□□□ 1.7
CDHR3-212ENST00000487084 GLT8D2Q9H1C3 349 aa25.65■■□□□ 1.7
CDHR3-212ENST00000487084 SPATA31C2B4DYI2 1134 aa25.64■■□□□ 1.7
CDHR3-212ENST00000487084 PKN1Q16512 942 aa25.64■■□□□ 1.7
CDHR3-212ENST00000487084 HSDL1Q3SXM5 330 aa25.64■■□□□ 1.7
CDHR3-212ENST00000487084 CCDC12Q8WUD4 166 aaPredicted RBP25.64■■□□□ 1.7
CDHR3-212ENST00000487084 ANO3Q9BYT9 981 aa25.64■■□□□ 1.7
CDHR3-212ENST00000487084 BCAS3Q9H6U6 928 aa25.64■■□□□ 1.7
CDHR3-212ENST00000487084 TMEM260Q9NX78 707 aa25.64■■□□□ 1.7
CDHR3-212ENST00000487084 NOP56O00567 594 aaKnown RBP25.63■■□□□ 1.69
CDHR3-212ENST00000487084 FOSP01100 380 aaPredicted RBP25.63■■□□□ 1.69
CDHR3-212ENST00000487084 NEDD9Q14511 834 aa25.63■■□□□ 1.69
CDHR3-212ENST00000487084 NFRKBQ6P4R8 1299 aa25.63■■□□□ 1.69
CDHR3-212ENST00000487084 CYFIP1Q7L576 1253 aa25.63■■□□□ 1.69
CDHR3-212ENST00000487084 TRIM22Q8IYM9 498 aa25.63■■□□□ 1.69
CDHR3-212ENST00000487084 ALG1Q9BT22 464 aa25.63■■□□□ 1.69
CDHR3-212ENST00000487084 HIPK3Q9H422 1215 aa25.63■■□□□ 1.69
CDHR3-212ENST00000487084 SCN10AQ9Y5Y9 1956 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 SOX1O00570 391 aaPredicted RBP25.62■■□□□ 1.69
CDHR3-212ENST00000487084 SUPT20HL2P0C7V6 817 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 ITGB5P18084 799 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 CYP2C18P33260 490 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 SP4Q02446 784 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 SSRP1Q08945 709 aaKnown RBP25.62■■□□□ 1.69
CDHR3-212ENST00000487084 AP3B2Q13367 1082 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 JAKMIP3Q5VZ66 844 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 KAT2BQ92831 832 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 GPRASP2Q96D09 838 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 KATNAL1Q9BW62 490 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 C6orf50Q9HD87 102 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 PKD2L1Q9P0L9 805 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 NOD1Q9Y239 953 aa25.62■■□□□ 1.69
CDHR3-212ENST00000487084 CYP2C9P11712 490 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 PSEN2P49810 448 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 MTMR1Q13613 665 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 SHHQ15465 462 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 C9orf50Q5SZB4 431 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 MFSD5Q6N075 450 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 CPLX2Q6PUV4 134 aaKnown RBP25.61■■□□□ 1.69
CDHR3-212ENST00000487084 METTL7BQ6UX53 244 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 TEX2Q8IWB9 1127 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 TMEM199Q8N511 208 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 CDHR1Q96JP9 859 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 VPS54Q9P1Q0 977 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 UBIAD1Q9Y5Z9 338 aa25.61■■□□□ 1.69
CDHR3-212ENST00000487084 ESYT2A0FGR8 921 aa25.6■■□□□ 1.69
CDHR3-212ENST00000487084 PPFIA4O75335 1185 aa25.6■■□□□ 1.69
CDHR3-212ENST00000487084 CLK2P49760 499 aaKnown RBP25.6■■□□□ 1.69
CDHR3-212ENST00000487084 EPHB4P54760 987 aa25.6■■□□□ 1.69
CDHR3-212ENST00000487084 PTPN11Q06124 597 aaPredicted RBP25.6■■□□□ 1.69
CDHR3-212ENST00000487084 MFSD10Q14728 455 aa25.6■■□□□ 1.69
CDHR3-212ENST00000487084 CCDC148Q8NFR7 591 aa25.6■■□□□ 1.69
CDHR3-212ENST00000487084 LRCH3Q96II8 777 aa25.6■■□□□ 1.69
CDHR3-212ENST00000487084 SLKQ9H2G2 1235 aaPredicted RBP25.6■■□□□ 1.69
CDHR3-212ENST00000487084 UMODL1Q5DID0 1318 aa25.6■■□□□ 1.69
CDHR3-212ENST00000487084 MYH7BA7E2Y1 1941 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 F2P00734 622 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 HOXD8P13378 290 aaPredicted RBP25.59■■□□□ 1.69
CDHR3-212ENST00000487084 CSF2RAP15509 400 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 AK2P54819 239 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 CCL23P55773 120 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 PPIGQ13427 754 aaKnown RBP eCLIP25.59■■□□□ 1.69
CDHR3-212ENST00000487084 ANKRD1Q15327 319 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 KIAA0753Q2KHM9 967 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 LRIT3Q3SXY7 679 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 REXO1Q8N1G1 1221 aaKnown RBP25.59■■□□□ 1.69
CDHR3-212ENST00000487084 C7orf31Q8N865 590 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 SENP7Q9BQF6 1050 aa25.59■■□□□ 1.69
CDHR3-212ENST00000487084 NOC4LQ9BVI4 516 aaKnown RBP25.59■■□□□ 1.69
CDHR3-212ENST00000487084 ZMYND12Q9H0C1 365 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms