RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 YTHDC1Q96MU7 727 aaKnown RBP5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 CRBNQ96SW2 442 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 CLEC1BQ9P126 229 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 MRVI1Q9Y6F6 885 aa5.42□□□□□ -1.54
SNRNP27-204ENST00000487029 CYP1A1P04798 512 aaPredicted RBP5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 EPHX1P07099 455 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 IL13P35225 146 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 GIPRP48546 466 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 EPHB4P54760 987 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 PPP2CBP62714 309 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 PPP2CAP67775 309 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 AMPD2Q01433 879 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 IGFL4Q6B9Z1 124 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 PKN3Q6P5Z2 889 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 TEX2Q8IWB9 1127 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 FAM126BQ8IXS8 530 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 ARHGEF39Q8N4T4 335 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 ZSWIM3Q96MP5 696 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 GPRC5CQ9NQ84 441 aa5.41□□□□□ -1.54
SNRNP27-204ENST00000487029 PLS3P13797 630 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 SELENOPP49908 381 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 INF2Q27J81 1249 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 GNPTABQ3T906 1256 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 TNNI3KQ59H18 835 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 NBPF6Q5VWK0 638 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 HEATR6Q6AI08 1181 aaKnown RBP5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 MILR1Q7Z6M3 343 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 ADAT2Q7Z6V5 191 aaKnown RBP5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 PLEKHH3Q7Z736 793 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 ZC3H18Q86VM9 953 aaKnown RBP5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 ZNF513Q8N8E2 541 aaPredicted RBP5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 PMFBP1Q8TBY8 1022 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 Q8TCH9 128 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 NBPF4Q96M43 638 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 AP5M1Q9H0R1 490 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 MEGF9Q9H1U4 602 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 BTG4Q9NY30 223 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 PRKAG3Q9UGI9 489 aa5.4□□□□□ -1.54
SNRNP27-204ENST00000487029 C22orf46C9J442 243 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 MUSKO15146 869 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 B4GALT4O60513 344 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 ZNF623O75123 536 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 THBDP07204 575 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 ANKS3Q6ZW76 656 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 DPH6Q7L8W6 267 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 KBTBD2Q8IY47 623 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 ZCCHC14Q8WYQ9 949 aaKnown RBP5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 SEC14L1Q92503 715 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 COPS5Q92905 334 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 TMEM168Q9H0V1 697 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 JADE2Q9NQC1 790 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 WASF3Q9UPY6 502 aa5.39□□□□□ -1.55
SNRNP27-204ENST00000487029 LOC105371045A0A1W2PR82 267 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 NPIPB8E9PQR5 432 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 SMAD7O15105 426 aaKnown RBP5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 FPR2P25090 351 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 FHL2Q14192 279 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 ARHGEF18Q6ZSZ5 1173 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 KLHL6Q8WZ60 621 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 RCC1LQ96I51 464 aaKnown RBP5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 MMP19Q99542 508 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 GBP3Q9H0R5 595 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 L2HGDHQ9H9P8 463 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 R3HCC1Q9Y3T6 440 aaKnown RBP5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 TESMINQ9Y4I5 508 aa5.38□□□□□ -1.55
SNRNP27-204ENST00000487029 TRBV23OR9-2A0A075B6M9 112 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 KLF4O43474 513 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 PPM1BO75688 479 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 GRB10Q13322 594 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 RAB33AQ14088 237 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 SLFN13Q68D06 897 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 C19orf47Q8N9M1 422 aaKnown RBP5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 HNRNPLLQ8WVV9 542 aaKnown RBP5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 ZNF341Q9BYN7 854 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 TRIM55Q9BYV6 548 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 OSBPL2Q9H1P3 480 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 C11orf21Q9P2W6 132 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 TCAF1Q9Y4C2 921 aa5.37□□□□□ -1.55
SNRNP27-204ENST00000487029 ARNTLO00327 626 aa5.36□□□□□ -1.55
SNRNP27-204ENST00000487029 U2SURPO15042 1029 aaKnown RBP5.36□□□□□ -1.55
SNRNP27-204ENST00000487029 SLC6A11P48066 632 aa5.36□□□□□ -1.55
SNRNP27-204ENST00000487029 CASP7P55210 303 aa5.36□□□□□ -1.55
SNRNP27-204ENST00000487029 CYP4F3Q08477 520 aa5.36□□□□□ -1.55
SNRNP27-204ENST00000487029 SCRN1Q12765 414 aa5.36□□□□□ -1.55
SNRNP27-204ENST00000487029 CCDC144BQ3MJ40 725 aa5.36□□□□□ -1.55
SNRNP27-204ENST00000487029 ACTR10Q9NZ32 417 aa5.36□□□□□ -1.55
SNRNP27-204ENST00000487029 APEX2Q9UBZ4 518 aa5.36□□□□□ -1.55
SNRNP27-204ENST00000487029 SHROOM4Q9ULL8 1493 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 TGFB2P61812 414 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 NKX3-2P78367 333 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 SLC7A5Q01650 507 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 FOXE3Q13461 319 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 SERINC3Q13530 473 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 ARRDC4Q8NCT1 418 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 ZSWIM4Q9H7M6 989 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 SIRPGQ9P1W8 387 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 CROTQ9UKG9 612 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 ZDHHC9Q9Y397 364 aa5.35□□□□□ -1.55
SNRNP27-204ENST00000487029 A0A1W2PQH9 124 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms