RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 PDE4BQ07343 736 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 CHAF1AQ13111 956 aaPredicted RBP8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 MCM6Q14566 821 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 PKN1Q16512 942 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 CRY2Q49AN0 593 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 KRBA2Q6ZNG9 492 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 TRIM50Q86XT4 487 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 STK11IPQ8N1F8 1099 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 DTWD1Q8N5C7 304 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 TRIML1Q8N9V2 468 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCDC150Q8NCX0 1101 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 ANKS1AQ92625 1134 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCDC34Q96HJ3 373 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 ZKSCAN3Q9BRR0 538 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 EFCC1Q9HA90 598 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 MKRN1Q9UHC7 482 aaKnown RBP8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 KCNH3Q9ULD8 1083 aa8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.06□□□□□ -1.12
SMARCAL1-212ENST00000486983 MYH13Q9UKX3 1938 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 TRIM75PA6NK02 468 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 USP17L12C9JPN9 530 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 USP17L21D6R901 530 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 CBFA2T2O43439 604 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 C21orf2O43822 256 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 PPP1R12BO60237 982 aaPredicted RBP8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 KLRK1P26718 216 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 PRDX5P30044 214 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 KIF5BP33176 963 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 RFC4P35249 363 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 NCAPHQ15003 741 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 R3HDM1Q15032 1099 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 GRIK5Q16478 980 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 DNTTIP2Q5QJE6 756 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 PRR23CQ6ZRP0 262 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 ZNF804AQ7Z570 1209 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 METTL16Q86W50 562 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 DGKHQ86XP1 1220 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 DZIP1Q86YF9 867 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 LRRC8AQ8IWT6 810 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 ALDH16A1Q8IZ83 802 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 CNBD1Q8NA66 436 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 CNNM3Q8NE01 707 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 CTCFLQ8NI51 663 aaPredicted RBP8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 NUP133Q8WUM0 1156 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 FERMT2Q96AC1 680 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 PYM1Q9BRP8 204 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 SH3GLB2Q9NR46 395 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 TCP11L1Q9NUJ3 509 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 PCMTD2Q9NV79 361 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 AATFQ9NY61 560 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 LRRC37AA6NMS7 1700 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 SBF2Q86WG5 1849 aa8.05□□□□□ -1.12
SMARCAL1-212ENST00000486983 C10orf71Q711Q0 1435 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 DDX60LQ5H9U9 1706 aaKnown RBP8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 BAG3O95817 575 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 LDHCP07864 332 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 PLAURQ03405 335 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 NFIXQ14938 502 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 POSTNQ15063 836 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCDC144BQ3MJ40 725 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 OLFM4Q6UX06 510 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 PTF1AQ7RTS3 328 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 TMC4Q7Z404 712 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 FAM35AQ86V20 835 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 AMOTL1Q8IY63 956 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 MLKLQ8NB16 471 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 TSEN2Q8NCE0 465 aaKnown RBP8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 SPATA20Q8TB22 786 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 CACTINQ8WUQ7 758 aaKnown RBP8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 PNMA5Q96PV4 448 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 LPIN3Q9BQK8 851 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 ZNF287Q9HBT7 754 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 PODXL2Q9NZ53 605 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 KCNJ14Q9UNX9 436 aa8.04□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCDC88AQ3V6T2 1871 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 WTIPA6NIX2 430 aaPredicted RBP8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 UBE2Q2LH0YL09 131 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 KIF2AO00139 706 aaPredicted RBP8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 NRDCO43847 1150 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 PLEKHA8P1O95397 391 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 TUBB4AP04350 444 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 LDHBP07195 334 aaKnown RBP8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 SCG2P13521 617 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 IL1R1P14778 569 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 CPB1P15086 417 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 ATP2B4P23634 1241 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 CALML3P27482 149 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 SARSP49591 514 aaKnown RBP8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 GNAQP50148 359 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 ST5P78524 1137 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCZ1BP86790 482 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCZ1P86791 482 aaPredicted RBP8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 LRMPQ12912 555 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 CCINQ13939 588 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 NPY5RQ15761 445 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 PFKFB3Q16875 520 aaPredicted RBP8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 LONRF3Q496Y0 759 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 C12orf60Q5U649 245 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 GALNT17Q6IS24 598 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 PRR5LQ6MZQ0 368 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms