RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 EHHADHQ08426 723 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRKCB-207ENST00000486868 DRC7Q8IY82 874 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 CHST13Q8NET6 341 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 TRERF1Q96PN7 1200 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 TEX13BQ9BXU2 312 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 XPO4Q9C0E2 1151 aaKnown RBP13.01□□□□□ -0.33
PRKCB-207ENST00000486868 TAF1DQ9H5J8 278 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-207ENST00000486868 JADE2Q9NQC1 790 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.01□□□□□ -0.33
PRKCB-207ENST00000486868 IFNKQ9P0W0 207 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 ZNF214Q9UL59 606 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-207ENST00000486868 KCNH4Q9UQ05 1017 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 SYNRGQ9UMZ2 1314 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 A0A0G2JLL6 359 aaPredicted RBP13□□□□□ -0.33
PRKCB-207ENST00000486868 MYMKA6NI61 221 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 ADM5C9JUS6 153 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 IRF6O14896 467 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 STAM2O75886 525 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 SERPINC1P01008 464 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 SPATA31C1P0DKV0 1188 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 CDK11BP21127 795 aaKnown RBP13□□□□□ -0.33
PRKCB-207ENST00000486868 CCNE1P24864 410 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 COPB2P35606 906 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 PRCPP42785 496 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 RPS6P62753 249 aaKnown RBP13□□□□□ -0.33
PRKCB-207ENST00000486868 PDE4DQ08499 809 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 PPIL2Q13356 520 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 MCM6Q14566 821 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 EPHA7Q15375 998 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 GPR162Q16538 588 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 RNF207Q6ZRF8 634 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 ARMC9Q7Z3E5 817 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 PRRT2Q7Z6L0 340 aaPredicted RBP13□□□□□ -0.33
PRKCB-207ENST00000486868 CPXCR1Q8N123 301 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 SYT2Q8N9I0 419 aaPredicted RBP13□□□□□ -0.33
PRKCB-207ENST00000486868 CDCA5Q96FF9 252 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 PLIN2Q99541 437 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 HSD17B14Q9BPX1 270 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 THAP9Q9H5L6 903 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 RNF146Q9NTX7 359 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 DNM3Q9UQ16 869 aa13□□□□□ -0.33
PRKCB-207ENST00000486868 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13□□□□□ -0.33
PRKCB-207ENST00000486868 A0A1B0GTH6 734 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 FRMD3A2A2Y4 597 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
PRKCB-207ENST00000486868 MED24O75448 989 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 KIF20AO95235 890 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 PLA2G4BP0C869 781 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 ATP1A3P13637 1013 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 TAL1P17542 331 aaPredicted RBP12.99□□□□□ -0.33
PRKCB-207ENST00000486868 SLC12A3P55017 1021 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 ECM1Q16610 540 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 MUM1L1Q5H9M0 696 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 CCDC186Q7Z3E2 898 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 KCNK18Q7Z418 384 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 CATSPER3Q86XQ3 398 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 CCDC65Q8IXS2 484 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 GUF1Q8N442 669 aaKnown RBP12.99□□□□□ -0.33
PRKCB-207ENST00000486868 CCDC150Q8NCX0 1101 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 ANKRD20A12PQ8NF67 263 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 RDM1Q8NG50 284 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 NELFBQ8WX92 580 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 DDX12PQ92771 950 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 DNAJC19Q96DA6 116 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 PDCD2LQ9BRP1 358 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 TEKT3Q9BXF9 490 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 TBC1D22BQ9NU19 505 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 KCND2Q9NZV8 630 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 COL20A1Q9P218 1284 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 FBXO40Q9UH90 709 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 LIMA1Q9UHB6 759 aaKnown RBP12.99□□□□□ -0.33
PRKCB-207ENST00000486868 KIAA1024Q9UPX6 916 aa12.99□□□□□ -0.33
PRKCB-207ENST00000486868 GAS7O60861 476 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 EYA4O95677 639 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 STAT3P40763 770 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 PABPC4Q13310 644 aaKnown RBP eCLIP12.98□□□□□ -0.33
PRKCB-207ENST00000486868 NR1I3Q14994 352 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 TMEM132BQ14DG7 1078 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
PRKCB-207ENST00000486868 FILIP1LQ4L180 1135 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 LDLRAD1Q5T700 205 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 NCAPH2Q6IBW4 605 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
PRKCB-207ENST00000486868 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
PRKCB-207ENST00000486868 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 SPC24Q8NBT2 197 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 CYP2W1Q8TAV3 490 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 GPRASP2Q96D09 838 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 EIF2AK1Q9BQI3 630 aaKnown RBP12.98□□□□□ -0.33
PRKCB-207ENST00000486868 ZNF577Q9BSK1 485 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 PXMP2Q9NR77 195 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 CTNND2Q9UQB3 1225 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
PRKCB-207ENST00000486868 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
PRKCB-207ENST00000486868 POTECB2RU33 542 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms