RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 X6R8D5 127 aa6.79□□□□□ -1.32
SMC4-218ENST00000486711 ITGB3P05106 788 aa6.78□□□□□ -1.32
SMC4-218ENST00000486711 SNRPB2P08579 225 aaKnown RBP6.78□□□□□ -1.32
SMC4-218ENST00000486711 SERINC3Q13530 473 aa6.78□□□□□ -1.32
SMC4-218ENST00000486711 ZXDCQ2QGD7 858 aaPredicted RBP6.78□□□□□ -1.32
SMC4-218ENST00000486711 SV2CQ496J9 727 aa6.78□□□□□ -1.32
SMC4-218ENST00000486711 FAM26FQ5R3K3 315 aa6.78□□□□□ -1.32
SMC4-218ENST00000486711 MILR1Q7Z6M3 343 aa6.78□□□□□ -1.32
SMC4-218ENST00000486711 ZNF227Q86WZ6 799 aa6.78□□□□□ -1.32
SMC4-218ENST00000486711 FAM178BQ8IXR5 827 aa6.78□□□□□ -1.32
SMC4-218ENST00000486711 FAM26EQ8N5C1 309 aa6.78□□□□□ -1.32
SMC4-218ENST00000486711 TRMT2BQ96GJ1 504 aaKnown RBP6.78□□□□□ -1.32
SMC4-218ENST00000486711 COA3Q9Y2R0 106 aaPredicted RBP6.78□□□□□ -1.32
SMC4-218ENST00000486711 CCDC85CA6NKD9 419 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 CPP00450 1065 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 SCG5P05408 212 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 ITGAVP06756 1048 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 BCL6P41182 706 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 ECI1P42126 302 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 ITGA1P56199 1179 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 KIAA2012Q0VF49 1180 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 CHRNA2Q15822 529 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 DDR2Q16832 855 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 RGL3Q3MIN7 710 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 ACBD5Q5T8D3 534 aaPredicted RBP6.77□□□□□ -1.33
SMC4-218ENST00000486711 CEP68Q76N32 757 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 FAM124AQ86V42 546 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 NLRP10Q86W26 655 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 TMEM169Q96HH4 297 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 CCDC140Q96MF4 163 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 GPR20Q99678 358 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 YIPF4Q9BSR8 244 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 PIF1Q9H611 641 aa6.77□□□□□ -1.33
SMC4-218ENST00000486711 TBX1O43435 398 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 SUSD5O60279 629 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 DDAH1O94760 285 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 CANXP27824 592 aaKnown RBP6.76□□□□□ -1.33
SMC4-218ENST00000486711 MAGEA10P43363 369 aaPredicted RBP6.76□□□□□ -1.33
SMC4-218ENST00000486711 TESK1Q15569 626 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 GIMAP6Q6P9H5 292 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 BORAQ6PGQ7 559 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 LRP10Q7Z4F1 713 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 CCDC103Q8IW40 242 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 LGI4Q8N135 537 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 DEPDC7Q96QD5 511 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 SYT3Q9BQG1 590 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 ST7Q9NRC1 585 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 TMEFF2Q9UIK5 374 aaPredicted RBP6.76□□□□□ -1.33
SMC4-218ENST00000486711 ZNF652Q9Y2D9 606 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 MYRFQ9Y2G1 1151 aa6.76□□□□□ -1.33
SMC4-218ENST00000486711 MROH6A6NGR9 719 aa6.75□□□□□ -1.33
SMC4-218ENST00000486711 B2RBV5 119 aa6.75□□□□□ -1.33
SMC4-218ENST00000486711 PLATP00750 562 aa6.75□□□□□ -1.33
SMC4-218ENST00000486711 NKX3-2P78367 333 aa6.75□□□□□ -1.33
SMC4-218ENST00000486711 IFRD2Q12894 506 aaPredicted RBP6.75□□□□□ -1.33
SMC4-218ENST00000486711 PPIL6Q8IXY8 311 aa6.75□□□□□ -1.33
SMC4-218ENST00000486711 CELF2-AS1Q8N7Q2 184 aa6.75□□□□□ -1.33
SMC4-218ENST00000486711 RBM15Q96T37 977 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMC4-218ENST00000486711 SMPD4Q9NXE4 827 aa6.75□□□□□ -1.33
SMC4-218ENST00000486711 TLDC2A0PJX2 215 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 H7BY64 318 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 INSRRP14616 1297 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 LTBRP36941 435 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 STAT5AP42229 794 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 KCNJ6P48051 423 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 ADAM17P78536 824 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 PRR31Q5SQ13 230 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 STK32CQ86UX6 486 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 KREMEN2Q8NCW0 462 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 MICAL1Q8TDZ2 1067 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 CCDC113Q9H0I3 377 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 SNTG2Q9NY99 539 aa6.74□□□□□ -1.33
SMC4-218ENST00000486711 ARNTLO00327 626 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 HGSO14964 777 aaPredicted RBP6.73□□□□□ -1.33
SMC4-218ENST00000486711 GFRA1P56159 465 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 LSAMPQ13449 338 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 RASA3Q14644 834 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 PUM1Q14671 1186 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMC4-218ENST00000486711 PRSS53Q2L4Q9 553 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 CR1LQ2VPA4 569 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 MCTP2Q6DN12 878 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 FAM177A1Q8N128 213 aaPredicted RBP6.73□□□□□ -1.33
SMC4-218ENST00000486711 TTC9BQ8N6N2 239 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 TXNDC5Q8NBS9 432 aaKnown RBP6.73□□□□□ -1.33
SMC4-218ENST00000486711 RCBTB1Q8NDN9 531 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 CHAMP1Q96JM3 812 aa6.73□□□□□ -1.33
SMC4-218ENST00000486711 C9orf118A6NHY6 69 aa6.72□□□□□ -1.33
SMC4-218ENST00000486711 DDX3XO00571 662 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMC4-218ENST00000486711 PDPK1O15530 556 aa6.72□□□□□ -1.33
SMC4-218ENST00000486711 GJB6O95452 261 aa6.72□□□□□ -1.33
SMC4-218ENST00000486711 ADAM9Q13443 819 aa6.72□□□□□ -1.33
SMC4-218ENST00000486711 TBC1D10BQ4KMP7 808 aaPredicted RBP6.72□□□□□ -1.33
SMC4-218ENST00000486711 EMC4Q5J8M3 183 aa6.72□□□□□ -1.33
SMC4-218ENST00000486711 STEAP3Q658P3 488 aa6.72□□□□□ -1.33
SMC4-218ENST00000486711 TOE1Q96GM8 510 aaKnown RBP6.72□□□□□ -1.33
SMC4-218ENST00000486711 LCORQ96JN0 433 aaPredicted RBP6.72□□□□□ -1.33
SMC4-218ENST00000486711 SAMD11Q96NU1 681 aa6.72□□□□□ -1.33
SMC4-218ENST00000486711 EPN3Q9H201 632 aa6.72□□□□□ -1.33
SMC4-218ENST00000486711 DTLQ9NZJ0 730 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms