RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 FAM86B2P0C5J1 330 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 CAPN2P17655 700 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 CYP3A7P24462 503 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 CCND2P30279 289 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 CIITAP33076 1130 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 MAGEA10P43363 369 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-229ENST00000486665 TRAPPC10P48553 1259 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 RILPL1Q5EBL4 403 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 LHX8Q68G74 356 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 ZNF467Q7Z7K2 595 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-229ENST00000486665 MBOAT7Q96N66 472 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 USP28Q96RU2 1077 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 SLC5A4Q9NY91 659 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 UBIAD1Q9Y5Z9 338 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 LAMA2P24043 3122 aaKnown RBP14.52□□□□□ -0.09
HDAC6-229ENST00000486665 IGLV3-22A0A075B6J6 115 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 ASB14A6NK59 587 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 SLC37A4O43826 429 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 EIF3JO75822 258 aaKnown RBP14.51□□□□□ -0.09
HDAC6-229ENST00000486665 RGS20O76081 388 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 SNAI1O95863 264 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-229ENST00000486665 COL6A1P12109 1028 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 XRCC5P13010 732 aaKnown RBP14.51□□□□□ -0.09
HDAC6-229ENST00000486665 ITGB5P18084 799 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 MCM7P33993 719 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 BMP8BP34820 402 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 ZNF76P36508 570 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 CEBPZQ03701 1054 aaKnown RBP14.51□□□□□ -0.09
HDAC6-229ENST00000486665 PDE4DQ08499 809 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 STXBP2Q15833 593 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 PPP4R3AQ6IN85 833 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 XRRA1Q6P2D8 792 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 MAMDC4Q6UXC1 1216 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 Q7L0L9 218 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 ARMCX2Q7L311 632 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 C4orf32Q8N8J7 132 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 UIMC1Q96RL1 719 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 APBA2Q99767 749 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 MXRA8Q9BRK3 442 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 TINF2Q9BSI4 451 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.51□□□□□ -0.09
HDAC6-229ENST00000486665 MRVI1Q9Y6F6 885 aa14.51□□□□□ -0.09
HDAC6-229ENST00000486665 ZNF236Q9UL36 1845 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 LOC102724159A0A0B4J2E5 919 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 MEIS1O00470 390 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 ARP10275 920 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 PWP2Q15269 919 aaKnown RBP14.5□□□□□ -0.09
HDAC6-229ENST00000486665 SF3A1Q15459 793 aaKnown RBP14.5□□□□□ -0.09
HDAC6-229ENST00000486665 Q4G0T1 1027 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 CEP55Q53EZ4 464 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 PRR16Q569H4 304 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 ANO1Q5XXA6 986 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 EEPD1Q7L9B9 569 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 LENG9Q96B70 501 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 ZNF396Q96N95 335 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-229ENST00000486665 WDR11Q9BZH6 1224 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 KATNBL1Q9H079 304 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 TMEM60Q9H2L4 133 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 JADE2Q9NQC1 790 aa14.5□□□□□ -0.09
HDAC6-229ENST00000486665 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-229ENST00000486665 DDX25Q9UHL0 483 aaKnown RBP14.5□□□□□ -0.09
HDAC6-229ENST00000486665 B4DLN1 442 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 CYP2C19P33261 490 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 SEMA3FQ13275 785 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 PTPAQ15257 358 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 LRRC26Q2I0M4 334 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 PRAMEF19Q5SWL8 479 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 OLFML2BQ68BL8 750 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 MOXD1Q6UVY6 613 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 PLA2G4DQ86XP0 818 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 POTEDQ86YR6 584 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 FBXO16Q8IX29 292 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-229ENST00000486665 MSL3Q8N5Y2 521 aaKnown RBP14.49□□□□□ -0.09
HDAC6-229ENST00000486665 GJA10Q969M2 543 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 CNPY2Q9Y2B0 182 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 ATP6V1DQ9Y5K8 247 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 MYH7BA7E2Y1 1941 aa14.49□□□□□ -0.09
HDAC6-229ENST00000486665 SYNGAP1Q96PV0 1343 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 MSH4O15457 936 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 GCFC2P16383 781 aaKnown RBP14.48□□□□□ -0.09
HDAC6-229ENST00000486665 NASPP49321 788 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-229ENST00000486665 PTGDRQ13258 359 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 ATL3Q6DD88 541 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 TAPT1Q6NXT6 567 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 SEPT14Q6ZU15 432 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 NIPA1Q7RTP0 329 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 SLC17A8Q8NDX2 589 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 HAS1Q92839 578 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 INPP4AQ96PE3 977 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-229ENST00000486665 MTMR9Q96QG7 549 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 MPHOSPH6Q99547 160 aaKnown RBP14.48□□□□□ -0.09
HDAC6-229ENST00000486665 NAP1L4Q99733 375 aaKnown RBP14.48□□□□□ -0.09
HDAC6-229ENST00000486665 PDGFCQ9NRA1 345 aa14.48□□□□□ -0.09
HDAC6-229ENST00000486665 UNC80Q8N2C7 3258 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 CUL9Q8IWT3 2517 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 PLXNA1Q9UIW2 1896 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 SPATA31C2B4DYI2 1134 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 NEMFO60524 1076 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 ATP9AO75110 1047 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 STAM2O75886 525 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms