RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 GDF15Q99988 308 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 XPNPEP3Q9NQH7 507 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 FBXO40Q9UH90 709 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 NRBP1Q9UHY1 535 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 TACC3Q9Y6A5 838 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 TAF6LQ9Y6J9 622 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 KLF18A0A0U1RQI7 1052 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 CTDNEP1O95476 244 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 FDX1P10109 184 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 CCT2P78371 535 aaKnown RBP10.22□□□□□ -0.77
COL12A1-208ENST00000486533 LRRC41Q15345 812 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 CCDC96Q2M329 555 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 RASGRP2Q7LDG7 609 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 LRRC8AQ8IWT6 810 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 CHST13Q8NET6 341 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 FBXO18Q8NFZ0 1043 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 STAG1Q8WVM7 1258 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 ORC3Q9UBD5 711 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-208ENST00000486533 MCM3APO60318 1980 aa10.21□□□□□ -0.77
COL12A1-208ENST00000486533 DNAJC25-GNG10A0A024R161 153 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 IKBKBO14920 756 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 PGK1P00558 417 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 AKR1A1P14550 325 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 BMP8BP34820 402 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 ADCYAP1R1P41586 468 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 RTP1P59025 263 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 NLRP12P59046 1061 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 MDM2Q00987 491 aaPredicted RBP10.21□□□□□ -0.78
COL12A1-208ENST00000486533 CEBPZQ03701 1054 aaKnown RBP10.21□□□□□ -0.78
COL12A1-208ENST00000486533 PTPN14Q15678 1187 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 MYSM1Q5VVJ2 828 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 CEP135Q66GS9 1140 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 RCSD1Q6JBY9 416 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 CCDC174Q6PII3 467 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 MFSD6Q6ZSS7 791 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 RNF180Q86T96 592 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 MB21D2Q8IYB1 491 aaPredicted RBP10.21□□□□□ -0.78
COL12A1-208ENST00000486533 FMR1NBQ8N0W7 255 aaPredicted RBP10.21□□□□□ -0.78
COL12A1-208ENST00000486533 MSL3Q8N5Y2 521 aaKnown RBP10.21□□□□□ -0.78
COL12A1-208ENST00000486533 ANKRD7Q92527 254 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 FERMT2Q96AC1 680 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 LENG1Q96BZ8 264 aaPredicted RBP10.21□□□□□ -0.78
COL12A1-208ENST00000486533 AGBL1Q96MI9 1066 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 MTA3Q9BTC8 594 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 LRRC2Q9BYS8 371 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 UBE2OQ9C0C9 1292 aaKnown RBP10.21□□□□□ -0.78
COL12A1-208ENST00000486533 ACAD9Q9H845 621 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 RNF146Q9NTX7 359 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 PRKAG2Q9UGJ0 569 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 DACH1Q9UI36 760 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 ZHX1Q9UKY1 873 aaPredicted RBP10.21□□□□□ -0.78
COL12A1-208ENST00000486533 ATP11BQ9Y2G3 1177 aa10.21□□□□□ -0.78
COL12A1-208ENST00000486533 SYNGAP1Q96PV0 1343 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 STK36Q9NRP7 1315 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 PPP6R2O75170 966 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 FGRP09769 529 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 ZNF865P0CJ78 1059 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-208ENST00000486533 ALAS1P13196 640 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 CMA1P23946 247 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 SNAP25P60880 206 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 SNW1Q13573 536 aaKnown RBP10.2□□□□□ -0.78
COL12A1-208ENST00000486533 AKNAD1Q5T1N1 836 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 TBC1D10CQ8IV04 446 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 ELOA2Q8IYF1 753 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-208ENST00000486533 LINC00301Q8NCQ3 95 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 KIF18AQ8NI77 898 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 DCAF4Q8WV16 495 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 LBHD1Q9BQE6 289 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-208ENST00000486533 RNF41Q9H4P4 317 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-208ENST00000486533 KIAA1468Q9P260 1216 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 PRR12Q9ULL5 1215 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 PCDHA7Q9UN72 937 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 COL6A3P12111 3177 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 ZNF536O15090 1300 aa10.2□□□□□ -0.78
COL12A1-208ENST00000486533 CCDC69A6NI79 296 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 PLA2G6O60733 806 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 SNAI1O95863 264 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 TOP1P11387 765 aaKnown RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 PCP11498 1178 aaKnown RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 SKILP12757 684 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 SFPQP23246 707 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 SLC16A2P36021 539 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 SART3Q15020 963 aaKnown RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 SAFBQ15424 915 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 TRIM60Q495X7 471 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 UTP14CQ5TAP6 766 aaKnown RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 MAMDC4Q6UXC1 1216 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 SLC39A5Q6ZMH5 540 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 C11orf57Q6ZUT1 292 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 TDHQ8IZJ6 230 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 AOPEPQ8N6M6 819 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 C16orf45Q96MC5 204 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 TRERF1Q96PN7 1200 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 TMEM47Q9BQJ4 181 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 GTPBP4Q9BZE4 634 aaKnown RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 A1CFQ9NQ94 594 aaKnown RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 PRDM5Q9NQX1 630 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms