RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 PTPROQ16827 1216 aa18.84■□□□□ 0.61
PDE6D-205ENST00000486044 TRIM71Q2Q1W2 868 aaKnown RBP18.84■□□□□ 0.61
PDE6D-205ENST00000486044 GJD3Q8N144 294 aa18.84■□□□□ 0.61
PDE6D-205ENST00000486044 FBXO22Q8NEZ5 403 aa18.84■□□□□ 0.61
PDE6D-205ENST00000486044 AMNQ9BXJ7 453 aa18.84■□□□□ 0.61
PDE6D-205ENST00000486044 BRWD1Q9NSI6 2320 aa18.83■□□□□ 0.61
PDE6D-205ENST00000486044 MYH6P13533 1939 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 RSPH10B2B2RC85 870 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 RSPH10BP0C881 870 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 TCTN1Q2MV58 587 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 PUS10Q3MIT2 529 aaKnown RBP18.83■□□□□ 0.6
PDE6D-205ENST00000486044 MYSM1Q5VVJ2 828 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 FAM178BQ8IXR5 827 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 SAMD3Q8N6K7 520 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 KHSRPQ92945 711 aaKnown RBP eCLIP18.83■□□□□ 0.6
PDE6D-205ENST00000486044 SPATA33Q96N06 139 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 SAMD11Q96NU1 681 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 JMJD4Q9H9V9 463 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 SIP14410 1827 aa18.83■□□□□ 0.6
PDE6D-205ENST00000486044 MYH7BA7E2Y1 1941 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 TGFB3P10600 412 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 MYCLP12524 364 aaPredicted RBP18.82■□□□□ 0.6
PDE6D-205ENST00000486044 HOXD8P13378 290 aaPredicted RBP18.82■□□□□ 0.6
PDE6D-205ENST00000486044 SDSP20132 328 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 SSTR3P32745 418 aaPredicted RBP18.82■□□□□ 0.6
PDE6D-205ENST00000486044 THPOP40225 353 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 HSD17B4P51659 736 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 ZNF200P98182 395 aaPredicted RBP18.82■□□□□ 0.6
PDE6D-205ENST00000486044 HDAC1Q13547 482 aaPredicted RBP18.82■□□□□ 0.6
PDE6D-205ENST00000486044 CELF3Q5SZQ8 465 aaKnown RBP18.82■□□□□ 0.6
PDE6D-205ENST00000486044 TRAF7Q6Q0C0 670 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.82■□□□□ 0.6
PDE6D-205ENST00000486044 MYOCDQ8IZQ8 938 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 DBF4BQ8NFT6 615 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 MRPL38Q96DV4 380 aaKnown RBP18.82■□□□□ 0.6
PDE6D-205ENST00000486044 CD320Q9NPF0 282 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 C11orf16Q9NQ32 467 aa18.82■□□□□ 0.6
PDE6D-205ENST00000486044 FAM86C2PA6NEL3 165 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 B4E1Z4 1266 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 ALADP13716 330 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 HTRA4P83105 476 aaPredicted RBP18.81■□□□□ 0.6
PDE6D-205ENST00000486044 TRAF1Q13077 416 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 MBTPS1Q14703 1052 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 PTCRAQ6ISU1 281 aaPredicted RBP18.81■□□□□ 0.6
PDE6D-205ENST00000486044 SERINC5Q86VE9 423 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 ENAHQ8N8S7 591 aaPredicted RBP18.81■□□□□ 0.6
PDE6D-205ENST00000486044 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.81■□□□□ 0.6
PDE6D-205ENST00000486044 WNT8BQ93098 351 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 PDCD2LQ9BRP1 358 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 C17orf80Q9BSJ5 609 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 UBAC1Q9BSL1 405 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 KRT23Q9C075 422 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 ZSWIM5Q9P217 1185 aa18.81■□□□□ 0.6
PDE6D-205ENST00000486044 C17orf102A2RUQ5 167 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 PRR33A8MZF0 331 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 GGPS1O95749 300 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 GHRHRQ02643 423 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 IMMTQ16891 758 aaKnown RBP18.8■□□□□ 0.6
PDE6D-205ENST00000486044 HSDL1Q3SXM5 330 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 PLEKHG4Q58EX7 1191 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 STOX1Q6ZVD7 989 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 VSIG10LQ86VR7 867 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 SEPT8Q92599 483 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 ATP6V0A1Q93050 837 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 CNNM2Q9H8M5 875 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 MLXIPQ9HAP2 919 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 FAM50BQ9Y247 325 aa18.8■□□□□ 0.6
PDE6D-205ENST00000486044 EPC2Q52LR7 807 aa18.79■□□□□ 0.6
PDE6D-205ENST00000486044 TIGD5Q53EQ6 642 aa18.79■□□□□ 0.6
PDE6D-205ENST00000486044 SP7Q8TDD2 431 aaPredicted RBP18.79■□□□□ 0.6
PDE6D-205ENST00000486044 YME1L1Q96TA2 773 aa18.79■□□□□ 0.6
PDE6D-205ENST00000486044 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
PDE6D-205ENST00000486044 DIAPH3Q9NSV4 1193 aa18.79■□□□□ 0.6
PDE6D-205ENST00000486044 PCDHA1Q9Y5I3 950 aa18.79■□□□□ 0.6
PDE6D-205ENST00000486044 GRXCR2A6NFK2 248 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 KLRF2D3W0D1 207 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 H3BRB1 525 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 HIP1O00291 1037 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 ZBTB5O15062 677 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 CAND2O75155 1236 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 GNAT1P11488 350 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 CCND2P30279 289 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 PGM5Q15124 567 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 CSPP1Q1MSJ5 1256 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 IFIT1BQ5T764 474 aaKnown RBP18.78■□□□□ 0.6
PDE6D-205ENST00000486044 CWC27Q6UX04 472 aaKnown RBP18.78■□□□□ 0.6
PDE6D-205ENST00000486044 C16orf70Q9BSU1 422 aa18.78■□□□□ 0.6
PDE6D-205ENST00000486044 TUT1Q9H6E5 874 aaKnown RBP18.78■□□□□ 0.6
PDE6D-205ENST00000486044 OPLAHO14841 1288 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 SORBS3O60504 671 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 RGS20O76081 388 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 IL9P15248 144 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 MKRN4PQ13434 485 aaPredicted RBP18.77■□□□□ 0.6
PDE6D-205ENST00000486044 HIC1Q14526 733 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 BANK1Q8NDB2 785 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 NEK9Q8TD19 979 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 TOP1MTQ969P6 601 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 DSCC1Q9BVC3 393 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 USP26Q9BXU7 913 aa18.77■□□□□ 0.6
PDE6D-205ENST00000486044 MICAL3Q7RTP6 2002 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms