RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MMP19Q99542 508 aa12.81□□□□□ -0.36
SND1-212ENST00000485871 MXRA8Q9BRK3 442 aa12.81□□□□□ -0.36
SND1-212ENST00000485871 CSRNP2Q9H175 543 aa12.81□□□□□ -0.36
SND1-212ENST00000485871 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 MSH4O15457 936 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 COBLO75128 1261 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 RGS20O76081 388 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 TBC1D8O95759 1140 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 FCER1AP12319 257 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 MAPK4P31152 587 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.365e-8■■□□□ 13.9
SND1-212ENST00000485871 SPIRE1Q08AE8 756 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 KCTD2Q14681 263 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 ZNF792Q3KQV3 632 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 PRR16Q569H4 304 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 ARHGEF16Q5VV41 709 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 USP49Q70CQ1 688 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 PLA2G4DQ86XP0 818 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
SND1-212ENST00000485871 IGSF22Q8N9C0 903 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 INPP4AQ96PE3 977 aaPredicted RBP12.8□□□□□ -0.36
SND1-212ENST00000485871 IWS1Q96ST2 819 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 JADE2Q9NQC1 790 aa12.8□□□□□ -0.36
SND1-212ENST00000485871 LOC102724159A0A0B4J2E5 919 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 VWA3AA6NCI4 1184 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 STRNO43815 780 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 PGK2P07205 417 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 ARP10275 920 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 ADORA2AP29274 412 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 CTGFP29279 349 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 CCND2P30279 289 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 SETQ01105 290 aaPredicted RBP12.79□□□□□ -0.36
SND1-212ENST00000485871 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
SND1-212ENST00000485871 PWP2Q15269 919 aaKnown RBP12.79□□□□□ -0.36
SND1-212ENST00000485871 SPECC1Q5M775 1068 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 MORN1Q5T089 497 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 FBXO46Q6PJ61 603 aaPredicted RBP12.79□□□□□ -0.36
SND1-212ENST00000485871 B3GNT9Q6UX72 402 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
SND1-212ENST00000485871 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 MRPS27Q92552 414 aaKnown RBP12.79□□□□□ -0.36
SND1-212ENST00000485871 SLC5A5Q92911 643 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 GJA10Q969M2 543 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 FAM20AQ96MK3 541 aa12.79□□□□□ -0.36
SND1-212ENST00000485871 A0A087X0B3 334 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 A0A1B0GVL5 298 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 NR1I2O75469 434 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 PSMD10O75832 226 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 STAM2O75886 525 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 MYCLP12524 364 aaPredicted RBP12.78□□□□□ -0.36
SND1-212ENST00000485871 XRCC6P12956 609 aaKnown RBP eCLIP12.78□□□□□ -0.36
SND1-212ENST00000485871 PFKFB1P16118 471 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 ZNF76P36508 570 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 LONP1P36776 959 aaKnown RBP12.78□□□□□ -0.36
SND1-212ENST00000485871 TXKP42681 527 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 NDUFA8P51970 172 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 WDR78Q5VTH9 848 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 PLEKHH3Q7Z736 793 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 SLFN12Q8IYM2 578 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 USP6NLQ92738 828 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 MMTAG2Q9BU76 263 aaKnown RBP12.78□□□□□ -0.36
SND1-212ENST00000485871 WDR11Q9BZH6 1224 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 CCSER1Q9C0I3 900 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 TTC12Q9H892 705 aaPredicted RBP12.78□□□□□ -0.36
SND1-212ENST00000485871 TMEM63CQ9P1W3 806 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 ADD3Q9UEY8 706 aaKnown RBP12.78□□□□□ -0.36
SND1-212ENST00000485871 VAV3Q9UKW4 847 aa12.78□□□□□ -0.36
SND1-212ENST00000485871 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 SLC15A5A6NIM6 579 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 DHX15O43143 795 aaKnown RBP12.77□□□□□ -0.37
SND1-212ENST00000485871 IGHA2P01877 340 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 ICAM3P32942 547 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 TECP42680 631 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 CAP1Q01518 475 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 CCDC183Q5T5S1 534 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
SND1-212ENST00000485871 SYMPKQ92797 1274 aaKnown RBP12.77□□□□□ -0.37
SND1-212ENST00000485871 GPRASP2Q96D09 838 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 EPSTI1Q96J88 318 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 AK8Q96MA6 479 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 AGO4Q9HCK5 861 aaKnown RBP12.77□□□□□ -0.37
SND1-212ENST00000485871 KCNH7Q9NS40 1196 aa12.77□□□□□ -0.37
SND1-212ENST00000485871 DIS3Q9Y2L1 958 aaKnown RBP12.77□□□□□ -0.37
SND1-212ENST00000485871 POTEMA6NI47 508 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 PP2D1A8MPX8 630 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 GPR25O00155 361 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 HOXC6P09630 235 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 CDC25AP30304 524 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 ITGB3BPQ13352 177 aaPredicted RBP12.76□□□□□ -0.37
SND1-212ENST00000485871 MTMR1Q13613 665 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 PDIA5Q14554 519 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 STXBP2Q15833 593 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 MAMDC4Q6UXC1 1216 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 NPLOC4Q8TAT6 608 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 UIMC1Q96RL1 719 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms