RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 GPRASP2Q96D09 838 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 PGBD1Q96JS3 809 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 MBOAT7Q96N66 472 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 XPNPEP3Q9NQH7 507 aa10.63□□□□□ -0.71
SHROOM3-207ENST00000485780 IGLV3-22A0A075B6J6 115 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 CYP3A7-CYP3A51PA0A087WV96 503 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 KIF28PB7ZC32 967 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 ADCY6O43306 1168 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 ITGB5P18084 799 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 CYP3A7P24462 503 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 USP11P51784 963 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 SEMA3FQ13275 785 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 BECN1Q14457 450 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 NONOQ15233 471 aaKnown RBP eCLIP10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 LRRC41Q15345 812 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 CCDC144BQ3MJ40 725 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 LARP1BQ659C4 914 aaKnown RBP10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 TBCKQ8TEA7 893 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 SCFD2Q8WU76 684 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 LENG9Q96B70 501 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 PRKAG2Q9UGJ0 569 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 FAM184BQ9ULE4 1060 aa10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 GNEQ9Y223 722 aaKnown RBP10.62□□□□□ -0.71
SHROOM3-207ENST00000485780 CCDC194A0A1B0GVG4 234 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 FAM205CA6NFA0 338 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 FAM86B1E9PN63 330 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 MEIS1O00470 390 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 NKRFO15226 690 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 MAFGO15525 162 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 DUSP11O75319 330 aaKnown RBP10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 ARIH2O95376 493 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 FAM86B2P0C5J1 330 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 TGFB3P10600 412 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 MYCLP12524 364 aaPredicted RBP10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 PDIA4P13667 645 aaKnown RBP10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 SYT1P21579 422 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 ADCYAP1R1P41586 468 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 FXR1P51114 621 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 FOSBP53539 338 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 RTP1P59025 263 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 GUCY1B3Q02153 619 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 SAFBQ15424 915 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 GNPTABQ3T906 1256 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 DUSP28Q4G0W2 176 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 CEP55Q53EZ4 464 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 IQSEC1Q6DN90 963 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 KCNV1Q6PIU1 500 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 PIK3AP1Q6ZUJ8 805 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 NOSTRINQ8IVI9 506 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 MXRA8Q9BRK3 442 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 UPF3AQ9H1J1 476 aaKnown RBP10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 SPC25Q9HBM1 224 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 JADE2Q9NQC1 790 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 PDGFCQ9NRA1 345 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 ATP11BQ9Y2G3 1177 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 Q9Y3F1 56 aa10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 RANBP2P49792 3224 aaKnown RBP10.61□□□□□ -0.71
SHROOM3-207ENST00000485780 SCN10AQ9Y5Y9 1956 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 A0A1W2PPC1 479 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 SPATA31C2B4DYI2 1134 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 FIBPO43427 364 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 PGK1P00558 417 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 GCFC2P16383 781 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 SMPD1P17405 629 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 CST5P28325 142 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 DDIT3P35638 169 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 MAGEA10P43363 369 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 TRAPPC10P48553 1259 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 SETQ01105 290 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 TTLL4Q14679 1199 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 INF2Q27J81 1249 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 Q4G0T1 1027 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 PPP4R3AQ6IN85 833 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 EEPD1Q7L9B9 569 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 NEK8Q86SG6 692 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 EMID1Q96A84 441 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 FERMT2Q96AC1 680 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 CDHR1Q96JP9 859 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 LBHD1Q9BQE6 289 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 SENP7Q9BQF6 1050 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 WDR11Q9BZH6 1224 aa10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 DDX41Q9UJV9 622 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-207ENST00000485780 SYNRGQ9UMZ2 1314 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 ALPK3Q96L96 1907 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 CTAGE5O15320 804 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 STX6O43752 255 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 ADAMTS4O75173 837 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 HOXD8P13378 290 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 KCNA2P16389 499 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 UBA1P22314 1058 aaKnown RBP10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 TNFAIP2Q03169 654 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 ORC2Q13416 577 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 MTMR1Q13613 665 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 SLC39A5Q6ZMH5 540 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 SEPT14Q6ZU15 432 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 NLRX1Q86UT6 975 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 CYP2W1Q8TAV3 490 aa10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 LENG1Q96BZ8 264 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-207ENST00000485780 NAP1L4Q99733 375 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms