RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 HSD17B4P51659 736 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 FPGSQ05932 587 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 COL9A3Q14050 684 aaPredicted RBP12.25□□□□□ -0.45
DDX56-212ENST00000485367 STXBP2Q15833 593 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 BRDTQ58F21 947 aaPredicted RBP12.25□□□□□ -0.45
DDX56-212ENST00000485367 RNF20Q5VTR2 975 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 PDCL2Q8N4E4 241 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 KIAA1524Q8TCG1 905 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 PXMP2Q9NR77 195 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 POLR3EQ9NVU0 708 aa12.25□□□□□ -0.45
DDX56-212ENST00000485367 KIAA1217Q5T5P2 1943 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 GRIN2DO15399 1336 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 ARIH2O95376 493 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 KIF5BP33176 963 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 EPHB4P54760 987 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 SLC43A3Q8NBI5 491 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 TMEM87BQ96K49 555 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 MTG1Q9BT17 334 aaPredicted RBP12.24□□□□□ -0.45
DDX56-212ENST00000485367 MTA3Q9BTC8 594 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 LRRC2Q9BYS8 371 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 TRPV6Q9H1D0 765 aa12.24□□□□□ -0.45
DDX56-212ENST00000485367 GCOM1H8Y6P7 765 aaPredicted RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 CD4P01730 458 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 NR3C2P08235 984 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 POLR2MP0CAP2 368 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 MYCLP12524 364 aaPredicted RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 PURAQ00577 322 aaKnown RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 SLC20A2Q08357 652 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 GPR153Q6NV75 609 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 Q7L0L9 218 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 DEFB123Q8N688 67 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 RRP36Q96EU6 259 aaKnown RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 MAP3K14Q99558 947 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 PPP1R12CQ9BZL4 782 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 GADD45BO75293 160 aaPredicted RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 EIF3JO75822 258 aaKnown RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 ZSCAN22P10073 491 aaPredicted RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 RXRAP19793 462 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 GHRHRQ02643 423 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 LY6KQ17RY6 165 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 FOXD4L5Q5VV16 416 aaPredicted RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 MFSD5Q6N075 450 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 CCDC62Q6P9F0 684 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 FCHSD1Q86WN1 690 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 RAB11FIP4Q86YS3 637 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 FOXD4L4Q8WXT5 416 aaPredicted RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 LZTS2Q9BRK4 669 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 FUCA2Q9BTY2 467 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 SEZ6LQ9BYH1 1024 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 MAP3K20Q9NYL2 800 aaKnown RBP12.23□□□□□ -0.45
DDX56-212ENST00000485367 SLC12A7Q9Y666 1083 aa12.23□□□□□ -0.45
DDX56-212ENST00000485367 A6NJR5 290 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 KPNA6O60684 536 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 PLEKHA8P1O95397 391 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 GH1P01241 217 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 CALM1P0DP23 149 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 CALM2P0DP24 149 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 CALM3P0DP25 149 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 CYP2C18P33260 490 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 HSPA4P34932 840 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 LIFRP42702 1097 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 GNAQP50148 359 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 CHMP4BP1P59074 171 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 FAM47CQ5HY64 1035 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 CMTR1Q8N1G2 835 aaKnown RBP12.22□□□□□ -0.45
DDX56-212ENST00000485367 SAMD3Q8N6K7 520 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 AFG1LQ8WV93 481 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 CHAMP1Q96JM3 812 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 RNPC3Q96LT9 517 aaKnown RBP12.22□□□□□ -0.45
DDX56-212ENST00000485367 NEK1Q96PY6 1258 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 PDCD2LQ9BRP1 358 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 SPZ1Q9BXG8 430 aa12.22□□□□□ -0.45
DDX56-212ENST00000485367 TTC12Q9H892 705 aaPredicted RBP12.22□□□□□ -0.45
DDX56-212ENST00000485367 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
DDX56-212ENST00000485367 MYH7BA7E2Y1 1941 aa12.21□□□□□ -0.45
DDX56-212ENST00000485367 B4GALT4O60513 344 aa12.21□□□□□ -0.45
DDX56-212ENST00000485367 SMARCA1P28370 1054 aa12.21□□□□□ -0.45
DDX56-212ENST00000485367 ARHGAP1Q07960 439 aa12.21□□□□□ -0.45
DDX56-212ENST00000485367 PPIGQ13427 754 aaKnown RBP eCLIP12.21□□□□□ -0.453e-8■■□□□ 12.6
DDX56-212ENST00000485367 TMEM199Q8N511 208 aa12.21□□□□□ -0.45
DDX56-212ENST00000485367 SRBD1Q8N5C6 995 aaKnown RBP12.21□□□□□ -0.45
DDX56-212ENST00000485367 PPP1R13LQ8WUF5 828 aa12.21□□□□□ -0.45
DDX56-212ENST00000485367 ALDH8A1Q9H2A2 487 aaPredicted RBP12.21□□□□□ -0.45
DDX56-212ENST00000485367 HIPK3Q9H422 1215 aa12.21□□□□□ -0.45
DDX56-212ENST00000485367 DDX41Q9UJV9 622 aaKnown RBP12.21□□□□□ -0.45
DDX56-212ENST00000485367 MRVI1Q9Y6F6 885 aa12.21□□□□□ -0.45
DDX56-212ENST00000485367 CSF2RAP15509 400 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 CCND2P30279 289 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 PGM5Q15124 567 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 NBPF20Q3BBV1 942 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 SYNE3Q6ZMZ3 975 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 IL31RAQ8NI17 732 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 ZFP91Q96JP5 570 aaPredicted RBP12.2□□□□□ -0.46
DDX56-212ENST00000485367 TCEANC2Q96MN5 208 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 TRMT13Q9NUP7 481 aaKnown RBP12.2□□□□□ -0.46
DDX56-212ENST00000485367 SCN10AQ9Y5Y9 1956 aa12.2□□□□□ -0.46
DDX56-212ENST00000485367 STX6O43752 255 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms