RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 RAB30Q15771 203 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 HSDL1Q3SXM5 330 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 GDF6Q6KF10 455 aaPredicted RBP18.31■□□□□ 0.52
SIK3-211ENST00000485363 DEFB128Q7Z7B8 93 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 RAB11FIP4Q86YS3 637 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 CMTR1Q8N1G2 835 aaKnown RBP18.31■□□□□ 0.52
SIK3-211ENST00000485363 FANCBQ8NB91 859 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 CAGE1Q8TC20 777 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 ALG1Q9BT22 464 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 ZNF576Q9H609 170 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 MLXIPQ9HAP2 919 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 GTF2IRD1Q9UHL9 959 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 MSRAQ9UJ68 235 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 SLC4A7Q9Y6M7 1214 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 A0A0C4DFX4 3053 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 ZBBXA8MT70 800 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 HAS3O00219 553 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 MEIS2O14770 477 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 ZNF286BP0CG31 522 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 ACTN1P12814 892 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 HOXD8P13378 290 aaPredicted RBP18.3■□□□□ 0.52
SIK3-211ENST00000485363 FOSL2P15408 326 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 MRPS9P82933 396 aaKnown RBP18.3■□□□□ 0.52
SIK3-211ENST00000485363 KRT32Q14532 448 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 MFSD10Q14728 455 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 KIAA0753Q2KHM9 967 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 TSGA10IPQ3SY00 556 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 USP17L6PQ6QN14 398 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 TMTC3Q6ZXV5 915 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 MICU3Q86XE3 530 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 GPKOWQ92917 476 aaPredicted RBP eCLIP18.3■□□□□ 0.52
SIK3-211ENST00000485363 VWCEQ96DN2 955 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
SIK3-211ENST00000485363 HDAC6Q9UBN7 1215 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 GBF1Q92538 1859 aa18.3■□□□□ 0.52
SIK3-211ENST00000485363 ICAM3P32942 547 aa18.29■□□□□ 0.52
SIK3-211ENST00000485363 GRIN2CQ14957 1233 aa18.29■□□□□ 0.52
SIK3-211ENST00000485363 PCNX4Q63HM2 1172 aa18.29■□□□□ 0.52
SIK3-211ENST00000485363 XRRA1Q6P2D8 792 aa18.29■□□□□ 0.52
SIK3-211ENST00000485363 DHX32Q7L7V1 743 aaKnown RBP18.29■□□□□ 0.52
SIK3-211ENST00000485363 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
SIK3-211ENST00000485363 MAFAQ8NHW3 353 aaPredicted RBP18.29■□□□□ 0.52
SIK3-211ENST00000485363 PSTPIP2Q9H939 334 aa18.29■□□□□ 0.52
SIK3-211ENST00000485363 EYSQ5T1H1 3165 aa18.29■□□□□ 0.52
SIK3-211ENST00000485363 SPATA31C2B4DYI2 1134 aa18.28■□□□□ 0.52
SIK3-211ENST00000485363 FIBPO43427 364 aa18.28■□□□□ 0.52
SIK3-211ENST00000485363 EXOSC10Q01780 885 aaKnown RBP18.28■□□□□ 0.52
SIK3-211ENST00000485363 NEDD9Q14511 834 aa18.28■□□□□ 0.52
SIK3-211ENST00000485363 APOA5Q6Q788 366 aa18.28■□□□□ 0.52
SIK3-211ENST00000485363 AFAP1L1Q8TED9 768 aa18.28■□□□□ 0.52
SIK3-211ENST00000485363 CTAGE1Q96RT6 745 aa18.28■□□□□ 0.52
SIK3-211ENST00000485363 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
SIK3-211ENST00000485363 RBM28Q9NW13 759 aaKnown RBP18.28■□□□□ 0.52
SIK3-211ENST00000485363 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
SIK3-211ENST00000485363 UNC80Q8N2C7 3258 aa18.27■□□□□ 0.52
SIK3-211ENST00000485363 hCG_1642624A0A1W2PR95 340 aa18.27■□□□□ 0.52
SIK3-211ENST00000485363 NOP56O00567 594 aaKnown RBP18.27■□□□□ 0.52
SIK3-211ENST00000485363 HMGB1P09429 215 aaKnown RBP18.27■□□□□ 0.52
SIK3-211ENST00000485363 ATP2A2P16615 1042 aaKnown RBP18.27■□□□□ 0.52
SIK3-211ENST00000485363 RBL2Q08999 1139 aa18.27■□□□□ 0.52
SIK3-211ENST00000485363 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
SIK3-211ENST00000485363 NLRX1Q86UT6 975 aa18.27■□□□□ 0.52
SIK3-211ENST00000485363 RASEFQ8IZ41 740 aa18.27■□□□□ 0.52
SIK3-211ENST00000485363 TCEANC2Q96MN5 208 aa18.27■□□□□ 0.52
SIK3-211ENST00000485363 SLC28A3Q9HAS3 691 aa18.27■□□□□ 0.52
SIK3-211ENST00000485363 MYO9BQ13459 2157 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 ZBTB43O43298 467 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 PARNO95453 639 aaKnown RBP18.26■□□□□ 0.51
SIK3-211ENST00000485363 SELPP16109 830 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 SEMA3FQ13275 785 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 PTK7Q13308 1070 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 METTL7BQ6UX53 244 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 LRRC8DQ7L1W4 858 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 HEATR3Q7Z4Q2 680 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.26■□□□□ 0.51
SIK3-211ENST00000485363 DHX38Q92620 1227 aaKnown RBP18.26■□□□□ 0.51
SIK3-211ENST00000485363 C16orf70Q9BSU1 422 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 NKX2-4Q9H2Z4 354 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 DOCK5Q9H7D0 1870 aa18.26■□□□□ 0.51
SIK3-211ENST00000485363 TET1Q8NFU7 2136 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 H3BRB1 525 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 RTN1Q16799 776 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 CYFIP1Q7L576 1253 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 GAS2L1Q99501 681 aaPredicted RBP18.25■□□□□ 0.51
SIK3-211ENST00000485363 SENP7Q9BQF6 1050 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 TUT1Q9H6E5 874 aaKnown RBP18.25■□□□□ 0.51
SIK3-211ENST00000485363 BCAS3Q9H6U6 928 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 YBX2Q9Y2T7 364 aaKnown RBP18.25■□□□□ 0.51
SIK3-211ENST00000485363 PCDHA11Q9Y5I1 949 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 CHD9Q3L8U1 2897 aa18.25■□□□□ 0.51
SIK3-211ENST00000485363 CNTNAP5Q8WYK1 1306 aa18.24■□□□□ 0.51
SIK3-211ENST00000485363 SPDYE3A6NKU9 549 aa18.24■□□□□ 0.51
SIK3-211ENST00000485363 DLL1O00548 723 aa18.24■□□□□ 0.51
SIK3-211ENST00000485363 BAIAP3O94812 1187 aa18.24■□□□□ 0.51
SIK3-211ENST00000485363 LGALS2P05162 132 aa18.24■□□□□ 0.51
SIK3-211ENST00000485363 CKBP12277 381 aa18.24■□□□□ 0.51
SIK3-211ENST00000485363 RABGGTBP53611 331 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms