RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 UNC13DQ70J99 1090 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 NAP1L5Q96NT1 182 aaPredicted RBP18.69■□□□□ 0.58
CTSA-207ENST00000484855 TRERF1Q96PN7 1200 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.69■□□□□ 0.58
CTSA-207ENST00000484855 COL20A1Q9P218 1284 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 RPTORQ8N122 1335 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 COBLO75128 1261 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 DSG3P32926 999 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 CDKAL1Q5VV42 579 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 USP50Q70EL3 339 aaPredicted RBP18.69■□□□□ 0.58
CTSA-207ENST00000484855 DYMQ7RTS9 669 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 SAMD3Q8N6K7 520 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 MAP3K20Q9NYL2 800 aaKnown RBP18.69■□□□□ 0.58
CTSA-207ENST00000484855 CSADQ9Y600 493 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 PVALEFA0A1B0GWK0 134 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 E9PMD0 336 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 PSMA7O14818 248 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 GSDMDP57764 484 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 LRMPQ12912 555 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 CACTINQ8WUQ7 758 aaKnown RBP18.68■□□□□ 0.58
CTSA-207ENST00000484855 LOC285556D6RIA3 1793 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 POTEFA5A3E0 1075 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 SSBP05455 408 aaKnown RBP eCLIP18.68■□□□□ 0.58
CTSA-207ENST00000484855 POTEIP0CG38 1075 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 EPHX2P34913 555 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 COG2Q14746 738 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 LRCH2Q5VUJ6 765 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 POTEGQ6S5H5 508 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 POTEEQ6S8J3 1075 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 CATSPERGQ6ZRH7 1159 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 CATSPER3Q86XQ3 398 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 REPS2Q8NFH8 660 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 RBM46Q8TBY0 533 aaKnown RBP18.68■□□□□ 0.58
CTSA-207ENST00000484855 DDX12PQ92771 950 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 SLC5A5Q92911 643 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 PYCARDQ9ULZ3 195 aa18.68■□□□□ 0.58
CTSA-207ENST00000484855 PLA2G4BP0C869 781 aa18.67■□□□□ 0.58
CTSA-207ENST00000484855 FCER1AP12319 257 aa18.67■□□□□ 0.58
CTSA-207ENST00000484855 RPA1P27694 616 aa18.67■□□□□ 0.58
CTSA-207ENST00000484855 PPP1R2P41236 205 aa18.67■□□□□ 0.58
CTSA-207ENST00000484855 IREB2P48200 963 aaKnown RBP18.67■□□□□ 0.58
CTSA-207ENST00000484855 GPR162Q16538 588 aa18.67■□□□□ 0.58
CTSA-207ENST00000484855 SH3D19Q5HYK7 790 aa18.67■□□□□ 0.58
CTSA-207ENST00000484855 LRRC8AQ8IWT6 810 aa18.67■□□□□ 0.58
CTSA-207ENST00000484855 SYTL5Q8TDW5 730 aaPredicted RBP18.67■□□□□ 0.58
CTSA-207ENST00000484855 ZFP91Q96JP5 570 aaPredicted RBP18.67■□□□□ 0.58
CTSA-207ENST00000484855 RNF146Q9NTX7 359 aa18.67■□□□□ 0.58
CTSA-207ENST00000484855 INTS13Q9NVM9 706 aa18.67■□□□□ 0.58
CTSA-207ENST00000484855 MEIS1O00470 390 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 IDEP14735 1019 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 OAZ1P54368 228 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 RPS6P62753 249 aaKnown RBP18.66■□□□□ 0.58
CTSA-207ENST00000484855 STK4Q13043 487 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 SLC30A10Q6XR72 485 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 VSTM4Q8IW00 320 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 DHTKD1Q96HY7 919 aaPredicted RBP18.66■□□□□ 0.58
CTSA-207ENST00000484855 MXRA8Q9BRK3 442 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 ZNF577Q9BSK1 485 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 ADAMTS5Q9UNA0 930 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 FRMPD4Q14CM0 1322 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 TRIM49BA6NDI0 452 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 PSMD10O75832 226 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 NF2P35240 595 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 ARID5BQ14865 1188 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 SNRNP48Q6IEG0 339 aaKnown RBP18.66■□□□□ 0.58
CTSA-207ENST00000484855 RNF207Q6ZRF8 634 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 BMP2KQ9NSY1 1161 aaPredicted RBP18.66■□□□□ 0.58
CTSA-207ENST00000484855 LOXHD1Q8IVV2 1947 aa18.66■□□□□ 0.58
CTSA-207ENST00000484855 ZC3H4Q9UPT8 1303 aaKnown RBP18.65■□□□□ 0.58
CTSA-207ENST00000484855 GAS7O60861 476 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 SPATA31C1P0DKV0 1188 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 ARP10275 920 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 PPP2R5CQ13362 524 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 COBLL1Q53SF7 1204 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 NSMFQ6X4W1 530 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 OTOP1Q7RTM1 612 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 KIAA0895Q8NCT3 520 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 IL31RAQ8NI17 732 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 ZC3H15Q8WU90 426 aaKnown RBP18.65■□□□□ 0.58
CTSA-207ENST00000484855 CTAGE1Q96RT6 745 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 EIF2AK1Q9BQI3 630 aaKnown RBP18.65■□□□□ 0.58
CTSA-207ENST00000484855 POLR3CQ9BUI4 534 aaPredicted RBP18.65■□□□□ 0.58
CTSA-207ENST00000484855 RIPK3Q9Y572 518 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 A0A1B0GTH6 734 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 EML1O00423 815 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 CYP4A11Q02928 519 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 SPAG1Q07617 926 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 PCNX4Q63HM2 1172 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 GPBP1Q86WP2 473 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 CCDC150Q8NCX0 1101 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 KIAA1524Q8TCG1 905 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 HPS3Q969F9 1004 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 DNAJC19Q96DA6 116 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 SLC39A2Q9NP94 309 aa18.65■□□□□ 0.58
CTSA-207ENST00000484855 ZNF214Q9UL59 606 aaPredicted RBP18.65■□□□□ 0.58
CTSA-207ENST00000484855 MYPNQ86TC9 1320 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 GLTPD2A6NH11 291 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 CHMP2AO43633 222 aa18.64■□□□□ 0.57
CTSA-207ENST00000484855 PMS1P54277 932 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms