RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 USP2O75604 605 aaPredicted RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 USP1O94782 785 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 SNX4O95219 450 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 PLATP00750 562 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 TNNT1P13805 278 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 AKR1B1P15121 316 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 PCSK2P16519 638 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 RHCEP18577 417 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 CD9P21926 228 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 HOXA10P31260 410 aaPredicted RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 HOXC12P31275 282 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 RDXP35241 583 aaKnown RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 CCNFP41002 786 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 PSMC4P43686 418 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 PHKA1P46020 1223 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 RECQLP46063 649 aaPredicted RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 ASMTP46597 345 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 WNT7BP56706 349 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 RHDQ02161 417 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 UBXN1Q04323 297 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 PPP2R3AQ06190 1150 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 CDC16Q13042 620 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 USP4Q13107 963 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 ORC1Q13415 861 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 GALEQ14376 348 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 SPARCL1Q14515 664 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 SEMA3AQ14563 771 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 GRIN2CQ14957 1233 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 OASLQ15646 514 aaKnown RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 ZNF423Q2M1K9 1284 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 RABL6Q3YEC7 729 aaPredicted RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 CFAP100Q494V2 611 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 CCDC152Q4G0S7 254 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 TMEM240Q5SV17 173 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 MORN1Q5T089 497 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 GPATCH4Q5T3I0 446 aaKnown RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 LRCH2Q5VUJ6 765 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 NUTM2GQ5VZR2 741 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 FBXL19Q6PCT2 694 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 ANGPTL8Q6UXH0 198 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 BNC2Q6ZN30 1099 aaPredicted RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 LHFPL2Q6ZUX7 228 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 PDZD4Q76G19 769 aaPredicted RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 ENOSF1Q7L5Y1 443 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 GALNTL5Q7Z4T8 443 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 CCDC91Q7Z6B0 441 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 SLC9B2Q86UD5 537 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 MAP4K3Q8IVH8 894 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 SLITRK4Q8IW52 837 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 UNC45BQ8IWX7 931 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 TBC1D21Q8IYX1 336 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 CBARPQ8N350 705 aaPredicted RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 CPA6Q8N4T0 437 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 MYCT1Q8N699 235 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 FAM169BQ8N8A8 192 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 ZBTB38Q8NAP3 1195 aaPredicted RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 PCYOX1LQ8NBM8 494 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 OR52K2Q8NGK3 314 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 DEPTORQ8TB45 409 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 SUN5Q8TC36 379 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 BICD1Q96G01 975 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 CCDC114Q96M63 670 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 TIGD1Q96MW7 591 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 JAKMIP1Q96N16 626 aaKnown RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 NT5C1BQ96P26 610 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 TTC1Q99614 292 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 SPATA9Q9BWV2 254 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 TTLL2Q9BWV7 592 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 TNKS2Q9H2K2 1166 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 BRD9Q9H8M2 597 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 EHMT1Q9H9B1 1298 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 VPS37BQ9H9H4 285 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 GRPEL1Q9HAV7 217 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 DACT1Q9NYF0 836 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 DDX20Q9UHI6 824 aaKnown RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 LAMP5Q9UJQ1 280 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 PTPN22Q9Y2R2 807 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 PARP3Q9Y6F1 533 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 DDX49Q9Y6V7 483 aaKnown RBP3.92□□□□□ -1.78
FXN-204ENST00000484259 PDS5BQ9NTI5 1447 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 LAMC3Q9Y6N6 1575 aa3.92□□□□□ -1.78
FXN-204ENST00000484259 BRD4O60885 1362 aaPredicted RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 TOP2AP11388 1531 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 SETD1BQ9UPS6 1966 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 C17orf113A0A1B0GUU1 675 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 HNRNPCL2B2RXH8 293 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ELL2O00472 640 aaPredicted RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 POLR3GO15318 223 aaPredicted RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 ZBTB43O43298 467 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ZBTB14O43829 449 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ZEB2O60315 1214 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 CTNND1O60716 968 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 HNRNPCL1O60812 293 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 TSC22D2O75157 780 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 TMEM127O75204 238 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 SASH1O94885 1247 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 LETM1O95202 739 aaPredicted RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 TGDSO95455 350 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 STAMBPO95630 424 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 HSPA4LO95757 839 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms