RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 PDE4DQ08499 809 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 USP17L24Q0WX57 530 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 SHROOM1Q2M3G4 852 aaPredicted RBP10.76□□□□□ -0.69
UFD1-208ENST00000484101 NBPF9Q3BBW0 867 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 TCP11X2Q5H9J9 407 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 ARMCX5Q6P1M9 558 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 USP17L6PQ6QN14 398 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 NIPA1Q7RTP0 329 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 PPFIBP1Q86W92 1011 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 CNGA4Q8IV77 575 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 MICALL2Q8IY33 904 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 GUF1Q8N442 669 aaKnown RBP10.76□□□□□ -0.69
UFD1-208ENST00000484101 PRPF38AQ8NAV1 312 aaKnown RBP10.76□□□□□ -0.69
UFD1-208ENST00000484101 ETNPPLQ8TBG4 499 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 TEPSINQ96N21 525 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 PNMA5Q96PV4 448 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 PANX2Q96RD6 677 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 NUP88Q99567 741 aaPredicted RBP10.76□□□□□ -0.69
UFD1-208ENST00000484101 SLF1Q9BQI6 1058 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 ZNF341Q9BYN7 854 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 TMX1Q9H3N1 280 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 BLOC1S4Q9NUP1 217 aa10.76□□□□□ -0.69
UFD1-208ENST00000484101 A0A1W2PQC6 194 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 POTEMA6NI47 508 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 KCNJ18B7U540 433 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 EDIL3O43854 480 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 RPA1P27694 616 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 EPHX2P34913 555 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 ZNF76P36508 570 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 JAG1P78504 1218 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 KCNJ12Q14500 433 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 USH1GQ495M9 461 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 CCDC65Q8IXS2 484 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 CCAR2Q8N163 923 aaKnown RBP10.75□□□□□ -0.69
UFD1-208ENST00000484101 NEK9Q8TD19 979 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 ACER1Q8TDN7 264 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 STAMQ92783 540 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 P2RX5Q93086 422 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 TSG101Q99816 390 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 POLR3CQ9BUI4 534 aaPredicted RBP10.75□□□□□ -0.69
UFD1-208ENST00000484101 WDR18Q9BV38 432 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 SAMSN1Q9NSI8 373 aaKnown RBP10.75□□□□□ -0.69
UFD1-208ENST00000484101 INTS13Q9NVM9 706 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 HACL1Q9UJ83 578 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 TLL2Q9Y6L7 1015 aa10.75□□□□□ -0.69
UFD1-208ENST00000484101 AKR1B15C9JRZ8 316 aaPredicted RBP10.74□□□□□ -0.69
UFD1-208ENST00000484101 N4BP3O15049 544 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 SLURP2P0DP57 97 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 BCRP11274 1271 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 CASP1P29466 404 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 PBX1P40424 430 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 HSD17B4P51659 736 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 COPB1P53618 953 aaKnown RBP10.74□□□□□ -0.69
UFD1-208ENST00000484101 STX17P56962 302 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 KRT31Q15323 416 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 CST9Q5W186 159 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 TTI2Q6NXR4 508 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 APTXQ7Z2E3 356 aaKnown RBP10.74□□□□□ -0.69
UFD1-208ENST00000484101 PNMA8AQ86V59 439 aaPredicted RBP10.74□□□□□ -0.69
UFD1-208ENST00000484101 SMYD4Q8IYR2 804 aaPredicted RBP10.74□□□□□ -0.69
UFD1-208ENST00000484101 SCYL3Q8IZE3 742 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 SPICE1Q8N0Z3 855 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 GPC2Q8N158 579 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 RETREG2Q8NC44 543 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 MED15Q96RN5 788 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 WDR11Q9BZH6 1224 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 TUFT1Q9NNX1 390 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 CNOT7Q9UIV1 285 aaKnown RBP10.74□□□□□ -0.69
UFD1-208ENST00000484101 ZNF112Q9UJU3 913 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 GDAQ9Y2T3 454 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 R3HCC1Q9Y3T6 440 aaKnown RBP10.74□□□□□ -0.69
UFD1-208ENST00000484101 LOC285556D6RIA3 1793 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 PHIPQ8WWQ0 1821 aa10.74□□□□□ -0.69
UFD1-208ENST00000484101 LGALS16A8MUM7 142 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 C19orf81C9J6K1 198 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 DYNC1I1O14576 645 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 OPLAHO14841 1288 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 GTF2F1P35269 517 aaKnown RBP eCLIP10.73□□□□□ -0.69
UFD1-208ENST00000484101 DNM2P50570 870 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 OAZ1P54368 228 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 EHHADHQ08426 723 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 PPP2R5CQ13362 524 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 MCM6Q14566 821 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 PTPN14Q15678 1187 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 PRR16Q569H4 304 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 CENPPQ6IPU0 288 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 XRRA1Q6P2D8 792 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 NYAP1Q6ZVC0 841 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 MIGA2Q7L4E1 593 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 CSGALNACT2Q8N6G5 542 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 MYRIPQ8NFW9 859 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 DDX12PQ92771 950 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 KIFC2Q96AC6 838 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 LENG9Q96B70 501 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 C12orf42Q96LP6 360 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 BAG1Q99933 345 aaPredicted RBP10.73□□□□□ -0.69
UFD1-208ENST00000484101 NUP58Q9BVL2 599 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 PICK1Q9NRD5 415 aa10.73□□□□□ -0.69
UFD1-208ENST00000484101 KCND2Q9NZV8 630 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms