RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 SIX5Q8N196 739 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 ZNF417Q8TAU3 575 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 CEP95Q96GE4 821 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 TTC14Q96N46 770 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 ZNF587Q96SQ5 575 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-207ENST00000483969 SLC30A3Q99726 388 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 KRT23Q9C075 422 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-207ENST00000483969 CNNM2Q9H8M5 875 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 EFCC1Q9HA90 598 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 TCP11L1Q9NUJ3 509 aa10.49□□□□□ -0.73
COL8A1-207ENST00000483969 WDR46O15213 610 aaKnown RBP10.48□□□□□ -0.73
COL8A1-207ENST00000483969 ADH7P40394 386 aa10.48□□□□□ -0.73
COL8A1-207ENST00000483969 HERVK_113P62684 666 aa10.48□□□□□ -0.73
COL8A1-207ENST00000483969 GPRC5AQ8NFJ5 357 aa10.48□□□□□ -0.73
COL8A1-207ENST00000483969 CD99L2Q8TCZ2 262 aa10.48□□□□□ -0.73
COL8A1-207ENST00000483969 CEP63Q96MT8 703 aa10.48□□□□□ -0.73
COL8A1-207ENST00000483969 PHACTR1Q9C0D0 580 aa10.48□□□□□ -0.73
COL8A1-207ENST00000483969 IL25Q9H293 177 aa10.48□□□□□ -0.73
COL8A1-207ENST00000483969 STX8Q9UNK0 236 aa10.48□□□□□ -0.73
COL8A1-207ENST00000483969 RBM19Q9Y4C8 960 aaKnown RBP10.48□□□□□ -0.73
COL8A1-207ENST00000483969 TRIM17Q9Y577 477 aa10.48□□□□□ -0.73
COL8A1-207ENST00000483969 PSMC4P43686 418 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 PRMT2P55345 433 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 FCGRTP55899 365 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 LACTBP83111 547 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-207ENST00000483969 TYRO3Q06418 890 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 DOC2BQ14184 412 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 HIF1AQ16665 826 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 FAM110CQ1W6H9 321 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 IQCA1Q86XH1 822 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 CLEC10AQ8IUN9 316 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 TBC1D10CQ8IV04 446 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 CCAR1Q8IX12 1150 aaKnown RBP10.47□□□□□ -0.73
COL8A1-207ENST00000483969 SPICE1Q8N0Z3 855 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 ANKRD13CQ8N6S4 541 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 GMCL1P1Q8NEA9 526 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 HSH2DQ96JZ2 352 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 NACC1Q96RE7 527 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 TANGO6Q9C0B7 1094 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 ANO2Q9NQ90 1003 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 IL17RBQ9NRM6 502 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 MORF4L1Q9UBU8 362 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 RABGAP1Q9Y3P9 1069 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 TACC3Q9Y6A5 838 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 ADGRA2Q96PE1 1338 aa10.47□□□□□ -0.73
COL8A1-207ENST00000483969 MYO5AQ9Y4I1 1855 aaKnown RBP10.47□□□□□ -0.73
COL8A1-207ENST00000483969 FLOT1O75955 427 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 ALBP02768 609 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 TOP1P11387 765 aaKnown RBP10.46□□□□□ -0.73
COL8A1-207ENST00000483969 NOVP48745 357 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 CCNA1P78396 465 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 KIAA1755Q5JYT7 1200 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 SLFN13Q68D06 897 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 FBXO46Q6PJ61 603 aaPredicted RBP10.46□□□□□ -0.73
COL8A1-207ENST00000483969 LBX2Q6XYB7 198 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 OTOP1Q7RTM1 612 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 DGKHQ86XP1 1220 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 MCOLN1Q9GZU1 580 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 LSG1Q9H089 658 aaKnown RBP10.46□□□□□ -0.73
COL8A1-207ENST00000483969 RBPJLQ9UBG7 517 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 RBM8AQ9Y5S9 174 aaKnown RBP10.46□□□□□ -0.73
COL8A1-207ENST00000483969 MYPNQ86TC9 1320 aa10.46□□□□□ -0.73
COL8A1-207ENST00000483969 PLIN4Q96Q06 1357 aa10.46□□□□□ -0.74
COL8A1-207ENST00000483969 AK9Q5TCS8 1911 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 B4E1Z4 1266 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 NMT2O60551 498 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 EIF5BO60841 1220 aaKnown RBP10.45□□□□□ -0.74
COL8A1-207ENST00000483969 NDUFB10O96000 172 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 CYP21A2P08686 494 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 BMP3P12645 472 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 FAM83BQ5T0W9 1011 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 RALYLQ86SE5 291 aaKnown RBP10.45□□□□□ -0.74
COL8A1-207ENST00000483969 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
COL8A1-207ENST00000483969 MB21D1Q8N884 522 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 PRPF38AQ8NAV1 312 aaKnown RBP10.45□□□□□ -0.74
COL8A1-207ENST00000483969 NCOA7Q8NI08 942 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 CHURC1Q8WUH1 139 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 COA7Q96BR5 231 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 UBAC1Q9BSL1 405 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 PAGR1Q9BTK6 254 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 SEMA6BQ9H3T3 888 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 CWC22Q9HCG8 908 aaKnown RBP10.45□□□□□ -0.74
COL8A1-207ENST00000483969 ZSWIM5Q9P217 1185 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 FEM1BQ9UK73 627 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 PTPN22Q9Y2R2 807 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 STARD13Q9Y3M8 1113 aa10.45□□□□□ -0.74
COL8A1-207ENST00000483969 CTDP1Q9Y5B0 961 aaPredicted RBP10.45□□□□□ -0.74
COL8A1-207ENST00000483969 NEDD4P46934 1319 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 ERICH2A1L162 156 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 E7EWF7 191 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 TNPO2O14787 897 aaKnown RBP10.44□□□□□ -0.74
COL8A1-207ENST00000483969 ZBED4O75132 1171 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 REC8O95072 547 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 MAPK4P31152 587 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 SLC1A4P43007 532 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 ERVK-24P63145 666 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 NECTIN1Q15223 517 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 RCSD1Q6JBY9 416 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 MICALL1Q8N3F8 863 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms