RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PPP4R3AQ6IN85 833 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 NOC3LQ8WTT2 800 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 TTYH3Q9C0H2 523 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 PANK4Q9NVE7 773 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 BAZ2AQ9UIF9 1905 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 MAP3K13O43283 966 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 SMIM24O75264 130 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 SCG2P13521 617 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 IL6STP40189 918 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 NCAPG2Q86XI2 1143 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 CCDC170Q8IYT3 715 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 C4orf32Q8N8J7 132 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 RETREG2Q8NC44 543 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 RUBCNQ92622 972 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 PICK1Q9NRD5 415 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 ZFATQ9P243 1243 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 STIM2Q9P246 746 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 ZNF804BA4D1E1 1349 aa12.73□□□□□ -0.37
SEC61A1-205ENST00000483956 A0A1B0GUL6 1792 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 SRRM3A6NNA2 597 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 B4DLN1 442 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 PPIP5K2O43314 1243 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 RNF8O76064 485 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 TMOD1P28289 359 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 DNM2P50570 870 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 SLMAPQ14BN4 828 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 GLE1Q53GS7 698 aaKnown RBP12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 PIK3AP1Q6ZUJ8 805 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 CREG2Q8IUH2 290 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 SLC4A9Q96Q91 983 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 PIDD1Q9HB75 910 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.72□□□□□ -0.377e-23■■□□□ 13.7
SEC61A1-205ENST00000483956 BCL9O00512 1426 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 PHLPP1O60346 1717 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 LAMB1P07942 1786 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 LIN7AO14910 233 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 TRAPPC3O43617 180 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 SRGNP10124 158 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 STAT6P42226 847 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 PDIA5Q14554 519 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 PFKFB3Q16875 520 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 DZIP3Q86Y13 1208 aaKnown RBP12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 SRBD1Q8N5C6 995 aaKnown RBP12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 CCDC63Q8NA47 563 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 SPATA4Q8NEY3 305 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 DISC1Q9NRI5 854 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 RCCD1A6NED2 376 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 MCM7P33993 719 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 CDK17Q00537 523 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 ARHGAP22Q7Z5H3 698 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 TBC1D1Q86TI0 1168 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 OSBPL1AQ9BXW6 950 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 NDST4Q9H3R1 872 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 EHD2Q9NZN4 543 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
SEC61A1-205ENST00000483956 SMIM22K7EJ46 135 aa12.71□□□□□ -0.37
SEC61A1-205ENST00000483956 ORC4O43929 436 aa12.71□□□□□ -0.37
SEC61A1-205ENST00000483956 GUCY2FP51841 1108 aa12.71□□□□□ -0.37
SEC61A1-205ENST00000483956 NLRP5P59047 1200 aa12.71□□□□□ -0.37
SEC61A1-205ENST00000483956 ITIH3Q06033 890 aa12.71□□□□□ -0.37
SEC61A1-205ENST00000483956 ZNF572Q7Z3I7 529 aaPredicted RBP12.71□□□□□ -0.37
SEC61A1-205ENST00000483956 TAX1BP1Q86VP1 789 aa12.71□□□□□ -0.37
SEC61A1-205ENST00000483956 NFU1Q9UMS0 254 aa12.71□□□□□ -0.37
SEC61A1-205ENST00000483956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.71□□□□□ -0.37
SEC61A1-205ENST00000483956 MACROD2A1Z1Q3 448 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 DPPA5A6NC42 116 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 TRIM49BA6NDI0 452 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 HMGB1P1B2RPK0 211 aaPredicted RBP12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 PSMA7O14818 248 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 RHOBTB3O94955 611 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 CALML3P27482 149 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 SF3A3Q12874 501 aaKnown RBP eCLIP12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 NAALADL2Q58DX5 795 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 TTI2Q6NXR4 508 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 MAEAQ7L5Y9 396 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 GIMAP8Q8ND71 665 aaPredicted RBP12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 FAM81AQ8TBF8 368 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 CNKSR1Q969H4 720 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 ZNF232Q9UNY5 417 aa12.71□□□□□ -0.38
SEC61A1-205ENST00000483956 ESYT3A0FGR9 886 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 KLRC4O43908 158 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 GHRP10912 638 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 IGHMBP2P38935 993 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 CARSP49589 748 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 PMS1P54277 932 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 ZBED6P86452 979 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 RIPK1Q13546 671 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 CCDC152Q4G0S7 254 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms