RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 IMPACTQ9P2X3 320 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 STK17AQ9UEE5 414 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 ADD3Q9UEY8 706 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 CCPG1Q9ULG6 757 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 ZHX2Q9Y6X8 837 aa9.9□□□□□ -0.82
CDC42SE1-204ENST00000483763 POTEFA5A3E0 1075 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 USP27XA6NNY8 438 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 EML1O00423 815 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 SPATA31C1P0DKV0 1188 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 CCT6AP40227 531 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 BACE1P56817 501 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 MUM1L1Q5H9M0 696 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 HYIQ5T013 277 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 POTEGQ6S5H5 508 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 POTEEQ6S8J3 1075 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 SLFN12Q8IYM2 578 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 HOOK2Q96ED9 719 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 CDK5RAP3Q96JB5 506 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 SLC38A10Q9HBR0 1119 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 SLC39A2Q9NP94 309 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 ADARB2Q9NS39 739 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 VAV3Q9UKW4 847 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 MRPL11Q9Y3B7 192 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 MEIS1O00470 390 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 HMGCS2P54868 508 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 DCAF15Q66K64 600 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 TTI2Q6NXR4 508 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 ZNF280CQ8ND82 737 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 DNAJC19Q96DA6 116 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 PURBQ96QR8 312 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 NAP1L4Q99733 375 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 RIPK3Q9Y572 518 aa9.89□□□□□ -0.83
CDC42SE1-204ENST00000483763 NPHP3-ACAD11A0A0J9YXS1 232 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 LRRC10BA6NIK2 292 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 TBX3O15119 743 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 CBFA2T2O43439 604 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 ZNF76P36508 570 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 AMPD3Q01432 767 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 CACNB1Q02641 598 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 EHHADHQ08426 723 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 RAD51AP2Q09MP3 1159 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 TBX2Q13207 712 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 KRT31Q15323 416 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 CEP135Q66GS9 1140 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 NCAPH2Q6IBW4 605 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 CREBRFQ8IUR6 639 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 IL31RAQ8NI17 732 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 DUSP9Q99956 384 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 FGFBP2Q9BYJ0 223 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 EXOC1Q9NV70 894 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 PPP1R9AQ9ULJ8 1098 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 VWA5AO00534 786 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 ARP10275 920 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 ALAS1P13196 640 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 IDEP14735 1019 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 ITGB5P18084 799 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 HSD17B4P51659 736 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 GSDMDP57764 484 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 CYP4A11Q02928 519 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 ARSHQ5FYA8 562 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 ANKRD40Q6AI12 368 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 UNC13DQ70J99 1090 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 OTOP1Q7RTM1 612 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 DCPSQ96C86 337 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 ATG4CQ96DT6 458 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 FAM20AQ96MK3 541 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 RGL1Q9NZL6 768 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 ABCB11O95342 1321 aa9.88□□□□□ -0.83
CDC42SE1-204ENST00000483763 ADM5C9JUS6 153 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 USP2O75604 605 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 SSBP05455 408 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 SFPQP23246 707 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 PBX1P40424 430 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 ADKP55263 362 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 TRAF1Q13077 416 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 TPD52L1Q16890 204 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 CEP55Q53EZ4 464 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 TCP11X2Q5H9J9 407 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 SPECC1LQ69YQ0 1117 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 SEMA6BQ9H3T3 888 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 BCAS3Q9H6U6 928 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 PICK1Q9NRD5 415 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 GINM1Q9NU53 330 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 PVALEFA0A1B0GWK0 134 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 KCNJ18B7U540 433 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 PSMA7O14818 248 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 ZBTB39O15060 712 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 PSMD10O75832 226 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 PLA2G4BP0C869 781 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 CYP11B2P19099 503 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 RPA1P27694 616 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 SLC12A3P55017 1021 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 GRM1Q13255 1194 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 KCNJ12Q14500 433 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 HSP90AA2PQ14568 343 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 LRRC41Q15345 812 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 TC2NQ8N9U0 490 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms