RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, human

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRE-208	ENST00000483564	RGPD2	P0DJD1	1756 aa		10.14	□□□□□ -0.79
GABRE-208	ENST00000483564	COL18A1	P39060	1754 aa		10.14	□□□□□ -0.79
GABRE-208	ENST00000483564	GOLGA6L10	A6NI86	522 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	PP2D1	A8MPX8	630 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	PRKAB2	O43741	272 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	AKR1B10	O60218	316 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	MAGEA1	P43355	309 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	MAP3K12	Q12852	859 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	PKN1	Q16512	942 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	DBN1	Q16643	649 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	PTPRO	Q16827	1216 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	MTHFD1L	Q6UB35	978 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	GALNT15	Q8N3T1	639 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	MREG	Q8N565	214 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	FERMT2	Q96AC1	680 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	DUSP9	Q99956	384 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	NEUROG2	Q9H2A3	272 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	SLC5A4	Q9NY91	659 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564		V9GY48	417 aa	Predicted RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	RGPD5	Q99666	1765 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564		A6NHS1	94 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	EEF1G	P26641	437 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	CTNNA1	P35221	906 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	ZC3H6	P61129	1189 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	MAGOH	P61326	146 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	WTAP	Q15007	396 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	FAM133B	Q5BKY9	247 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	TTC38	Q5R3I4	469 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	CSGALNACT2	Q8N6G5	542 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	TEKT4	Q8WW24	435 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	MAGOHB	Q96A72	148 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	NLRP3	Q96P20	1036 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	UBE2O	Q9C0C9	1292 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	ZBTB3	Q9H5J0	574 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	C2CD2	Q9Y426	696 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	DNAJC8	O75937	253 aa	Predicted RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	TRIM37	O94972	964 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	DRD4	P21917	467 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	ECHS1	P30084	290 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	POLE2	P56282	527 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	ERVK-9	P63128	1117 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	MXRA7	P84157	204 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	CUL3	Q13618	768 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	CCDC178	Q5BJE1	867 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	MIIP	Q5JXC2	388 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	AKNAD1	Q5T1N1	836 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	TTI2	Q6NXR4	508 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	SPICE1	Q8N0Z3	855 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	PRCC	Q92733	491 aa	Predicted RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	BICD1	Q96G01	975 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	STRBP	Q96SI9	672 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	NOC4L	Q9BVI4	516 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	DNAAF2	Q9NVR5	837 aa	Known RBP	10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	AXIN2	Q9Y2T1	843 aa		10.13	□□□□□ -0.79
GABRE-208	ENST00000483564	LMO7	Q8WWI1	1683 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	RBM47	A0AV96	593 aa	Known RBP	10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	C5orf60	A6NFR6	353 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	VEGFA	P15692	232 aa	Predicted RBP	10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	KRT2	P35908	639 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	HSPA9	P38646	679 aa	Known RBP	10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	SLC1A4	P43007	532 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	TUB	P50607	506 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	PPP2R2A	P63151	447 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	ACBD5	Q5T8D3	534 aa	Predicted RBP	10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	NUGGC	Q68CJ6	796 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	ANKRD40	Q6AI12	368 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	IFNL3	Q8IZI9	196 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	ARFGAP2	Q8N6H7	521 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	PLBD2	Q8NHP8	589 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	RBM17	Q96I25	401 aa	Known RBP	10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	MMTAG2	Q9BU76	263 aa	Known RBP	10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	PHACTR1	Q9C0D0	580 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	MTFR1L	Q9H019	292 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	SLC52A2	Q9HAB3	445 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	PLAGL2	Q9UPG8	496 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	AGAP1	Q9UPQ3	857 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	LTBP4	Q8N2S1	1624 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	MYH10	P35580	1976 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	CCT8L1P	A6NM43	557 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564		A8MUI8	341 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	EVI5	O60447	810 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	PALM	O75781	387 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	POLD1	P28340	1107 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	MTIF2	P46199	727 aa	Known RBP	10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	KCNJ2	P63252	427 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	EHHADH	Q08426	723 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	PIK3AP1	Q6ZUJ8	805 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	RRAGA	Q7L523	313 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	ZNF654	Q8IZM8	581 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	CCDC63	Q8NA47	563 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	KCNV2	Q8TDN2	545 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	HPS3	Q969F9	1004 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	CNOT6L	Q96LI5	555 aa	Known RBP	10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	PHF20	Q9BVI0	1012 aa		10.12	□□□□□ -0.79
GABRE-208	ENST00000483564	NAPB	Q9H115	298 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms