RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CDKL5O76039 1030 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 DEXIO95424 95 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 MYSM1Q5VVJ2 828 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 MCTP2Q6DN12 878 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 AFG1LQ8WV93 481 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 GPRASP2Q96D09 838 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 GDF15Q99988 308 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 MTG1Q9BT17 334 aaPredicted RBP20.62■□□□□ 0.89
HDAC6-225ENST00000483506 ANO3Q9BYT9 981 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 C22orf23Q9BZE7 217 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 C6orf50Q9HD87 102 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 UBIAD1Q9Y5Z9 338 aa20.62■□□□□ 0.89
HDAC6-225ENST00000483506 PQBP1O60828 265 aaKnown RBP20.61■□□□□ 0.89
HDAC6-225ENST00000483506 CLTBP09497 229 aa20.61■□□□□ 0.89
HDAC6-225ENST00000483506 SYN1P17600 705 aa20.61■□□□□ 0.89
HDAC6-225ENST00000483506 GNA11P29992 359 aa20.61■□□□□ 0.89
HDAC6-225ENST00000483506 SREBF1P36956 1147 aa20.61■□□□□ 0.89
HDAC6-225ENST00000483506 ITGA7Q13683 1181 aa20.61■□□□□ 0.89
HDAC6-225ENST00000483506 FAM126BQ8IXS8 530 aa20.61■□□□□ 0.89
HDAC6-225ENST00000483506 VTI1AQ96AJ9 217 aa20.61■□□□□ 0.89
HDAC6-225ENST00000483506 ZFP91Q96JP5 570 aaPredicted RBP20.61■□□□□ 0.89
HDAC6-225ENST00000483506 SENP7Q9BQF6 1050 aa20.61■□□□□ 0.89
HDAC6-225ENST00000483506 DCDC2CA8MYV0 355 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 KIAA0355O15063 1070 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 PPFIA3O75145 1194 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 GGPS1O95749 300 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 MYL3P08590 195 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 ITGB5P18084 799 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 BMP8BP34820 402 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 FAAP100Q0VG06 881 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 NEDD9Q14511 834 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 ME3Q16798 604 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 NLRX1Q86UT6 975 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 DHX37Q8IY37 1157 aaKnown RBP20.6■□□□□ 0.89
HDAC6-225ENST00000483506 BICD2Q8TD16 824 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 CRYGNQ8WXF5 182 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 GTF3C6Q969F1 213 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 CDHR1Q96JP9 859 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 RTEL1Q9NZ71 1219 aa20.6■□□□□ 0.89
HDAC6-225ENST00000483506 TRIM43BA6NCK2 446 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 MAFGO15525 162 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 CD4P01730 458 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 DGKDQ16760 1214 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 CHRDL2Q6WN34 429 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 REXO1Q8N1G1 1221 aaKnown RBP20.59■□□□□ 0.89
HDAC6-225ENST00000483506 TRIM43Q96BQ3 446 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-225ENST00000483506 JADE2Q9NQC1 790 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 TMEM260Q9NX78 707 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 VPS54Q9P1Q0 977 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 PRKAG2Q9UGJ0 569 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 TBX21Q9UL17 535 aa20.59■□□□□ 0.89
HDAC6-225ENST00000483506 COLQQ9Y215 455 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-225ENST00000483506 TRIOBPQ9H2D6 2365 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 ADAMTS3O15072 1205 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 PPFIA4O75335 1185 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 LARGE1O95461 756 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 CTDNEP1O95476 244 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 MAGEA10P43363 369 aaPredicted RBP20.58■□□□□ 0.89
HDAC6-225ENST00000483506 PSMC6P62333 389 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 HSDL1Q3SXM5 330 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 METTL7BQ6UX53 244 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 SH3RF1Q7Z6J0 888 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 KAT2BQ92831 832 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 PGBD1Q96JS3 809 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 SPATA33Q96N06 139 aa20.58■□□□□ 0.89
HDAC6-225ENST00000483506 DOCK5Q9H7D0 1870 aa20.58■□□□□ 0.88
HDAC6-225ENST00000483506 CYP3A4P08684 503 aa20.57■□□□□ 0.88
HDAC6-225ENST00000483506 KCNA2P16389 499 aa20.57■□□□□ 0.88
HDAC6-225ENST00000483506 JAKMIP3Q5VZ66 844 aa20.57■□□□□ 0.88
HDAC6-225ENST00000483506 NFRKBQ6P4R8 1299 aa20.57■□□□□ 0.88
HDAC6-225ENST00000483506 DAGLBQ8NCG7 672 aa20.57■□□□□ 0.88
HDAC6-225ENST00000483506 GIMAP8Q8ND71 665 aaPredicted RBP20.57■□□□□ 0.88
HDAC6-225ENST00000483506 IL27Q8NEV9 243 aa20.57■□□□□ 0.88
HDAC6-225ENST00000483506 MXRA8Q9BRK3 442 aa20.57■□□□□ 0.88
HDAC6-225ENST00000483506 MLXIPQ9HAP2 919 aa20.57■□□□□ 0.88
HDAC6-225ENST00000483506 A0A1W2PPC1 479 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 TLR3O15455 904 aaKnown RBP20.56■□□□□ 0.88
HDAC6-225ENST00000483506 F2P00734 622 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 ARHGAP4P98171 946 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 PTPN11Q06124 597 aaPredicted RBP20.56■□□□□ 0.88
HDAC6-225ENST00000483506 MTMR1Q13613 665 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 NPY5RQ15761 445 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 CEP55Q53EZ4 464 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 GALNT17Q6IS24 598 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 NIPA1Q7RTP0 329 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 BCAS3Q9H6U6 928 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 PRDM5Q9NQX1 630 aaPredicted RBP20.56■□□□□ 0.88
HDAC6-225ENST00000483506 GTF3C3Q9Y5Q9 886 aa20.56■□□□□ 0.88
HDAC6-225ENST00000483506 M0R2N6 131 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 MEIS1O00470 390 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 NBPF20Q3BBV1 942 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 CYFIP1Q7L576 1253 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 SESTD1Q86VW0 696 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 NECAB1Q8N987 351 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 AIFM3Q96NN9 605 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 UPF2Q9HAU5 1272 aaKnown RBP20.55■□□□□ 0.88
HDAC6-225ENST00000483506 TMEM39AQ9NV64 488 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 PCDHA4Q9UN74 947 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 LIMCH1Q9UPQ0 1083 aa20.55■□□□□ 0.88
HDAC6-225ENST00000483506 HAS3O00219 553 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms