RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ADAMTS3O15072 1205 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 JAK2O60674 1132 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 KPNA6O60684 536 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 ITGB5P18084 799 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 ARHGAP1Q07960 439 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 ST3GAL1Q11201 340 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 SLC39A5Q6ZMH5 540 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 EMID1Q96A84 441 aaPredicted RBP23.88■■□□□ 1.41
SEC13-217ENST00000482647 VTI1AQ96AJ9 217 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 GPRASP2Q96D09 838 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 ALG1Q9BT22 464 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 STARD7Q9NQZ5 370 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 UBIAD1Q9Y5Z9 338 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 FRMPD3Q5JV73 1810 aa23.88■■□□□ 1.41
SEC13-217ENST00000482647 ELP1O95163 1332 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 MAFGO15525 162 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 ARHGAP4P98171 946 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 SP2Q02086 613 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 NEDD9Q14511 834 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 LRRC26Q2I0M4 334 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 CELF3Q5SZQ8 465 aaKnown RBP23.87■■□□□ 1.41
SEC13-217ENST00000482647 BLIDQ8IZY5 108 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 DAGLBQ8NCG7 672 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 JADE2Q9NQC1 790 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 POLR3EQ9NVU0 708 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 KCNJ14Q9UNX9 436 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 NR2E3Q9Y5X4 410 aa23.87■■□□□ 1.41
SEC13-217ENST00000482647 UBA1P22314 1058 aaKnown RBP23.86■■□□□ 1.41
SEC13-217ENST00000482647 ZNF76P36508 570 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 MTMR1Q13613 665 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 C1orf53Q5VUE5 145 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 MYSM1Q5VVJ2 828 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 CXCL17Q6UXB2 119 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 GIMAP8Q8ND71 665 aaPredicted RBP23.86■■□□□ 1.41
SEC13-217ENST00000482647 RASGRP4Q8TDF6 673 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 AFG1LQ8WV93 481 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 SENP7Q9BQF6 1050 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 MXRA8Q9BRK3 442 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 PHF20Q9BVI0 1012 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 MLXIPQ9HAP2 919 aa23.86■■□□□ 1.41
SEC13-217ENST00000482647 GGPS1O95749 300 aa23.85■■□□□ 1.41
SEC13-217ENST00000482647 MYL3P08590 195 aa23.85■■□□□ 1.41
SEC13-217ENST00000482647 CYP3A4P08684 503 aa23.85■■□□□ 1.41
SEC13-217ENST00000482647 SEMA3FQ13275 785 aa23.85■■□□□ 1.41
SEC13-217ENST00000482647 SNX17Q15036 470 aa23.85■■□□□ 1.41
SEC13-217ENST00000482647 CEP55Q53EZ4 464 aa23.85■■□□□ 1.41
SEC13-217ENST00000482647 PPTC7Q8NI37 304 aa23.85■■□□□ 1.41
SEC13-217ENST00000482647 HMGN5P82970 282 aaKnown RBP23.84■■□□□ 1.41
SEC13-217ENST00000482647 TRIM29Q14134 588 aa23.84■■□□□ 1.41
SEC13-217ENST00000482647 CRYGNQ8WXF5 182 aa23.84■■□□□ 1.41
SEC13-217ENST00000482647 SPATA33Q96N06 139 aa23.84■■□□□ 1.41
SEC13-217ENST00000482647 CD2BP2O95400 341 aaKnown RBP23.83■■□□□ 1.41
SEC13-217ENST00000482647 RTP1P59025 263 aa23.83■■□□□ 1.41
SEC13-217ENST00000482647 PURAQ00577 322 aaKnown RBP23.83■■□□□ 1.41
SEC13-217ENST00000482647 NPY5RQ15761 445 aa23.83■■□□□ 1.41
SEC13-217ENST00000482647 DGKDQ16760 1214 aa23.83■■□□□ 1.41
SEC13-217ENST00000482647 METTL7BQ6UX53 244 aa23.83■■□□□ 1.41
SEC13-217ENST00000482647 C7orf61Q8IZ16 206 aa23.83■■□□□ 1.41
SEC13-217ENST00000482647 CYP2W1Q8TAV3 490 aa23.83■■□□□ 1.41
SEC13-217ENST00000482647 TMX3Q96JJ7 454 aa23.83■■□□□ 1.41
SEC13-217ENST00000482647 MTG1Q9BT17 334 aaPredicted RBP23.83■■□□□ 1.41
SEC13-217ENST00000482647 GJB4Q9NTQ9 266 aa23.83■■□□□ 1.41
SEC13-217ENST00000482647 ATP11BQ9Y2G3 1177 aa23.83■■□□□ 1.41
SEC13-217ENST00000482647 A0A0U1RQG5 324 aaPredicted RBP23.82■■□□□ 1.4
SEC13-217ENST00000482647 M0R2N6 131 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 MEIS1O00470 390 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 SORBS3O60504 671 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 PPFIA4O75335 1185 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 MMP3P08254 477 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 USP11P51784 963 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 TRIM60Q495X7 471 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 CYFIP1Q7L576 1253 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 NIPA1Q7RTP0 329 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 SEZ6LQ9BYH1 1024 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 BRMS1Q9HCU9 246 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 KCNH7Q9NS40 1196 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 PDE4DIPQ5VU43 2346 aa23.82■■□□□ 1.4
SEC13-217ENST00000482647 NOP56O00567 594 aaKnown RBP23.81■■□□□ 1.4
SEC13-217ENST00000482647 ATP9AO75110 1047 aa23.81■■□□□ 1.4
SEC13-217ENST00000482647 KRT25Q7Z3Z0 450 aa23.81■■□□□ 1.4
SEC13-217ENST00000482647 FAM184AQ8NB25 1140 aa23.81■■□□□ 1.4
SEC13-217ENST00000482647 FAM86B1E9PN63 330 aa23.8■■□□□ 1.4
SEC13-217ENST00000482647 ARVCFO00192 962 aa23.8■■□□□ 1.4
SEC13-217ENST00000482647 FAM86B2P0C5J1 330 aa23.8■■□□□ 1.4
SEC13-217ENST00000482647 KCNA2P16389 499 aa23.8■■□□□ 1.4
SEC13-217ENST00000482647 ITGA7Q13683 1181 aa23.8■■□□□ 1.4
SEC13-217ENST00000482647 HSDL1Q3SXM5 330 aa23.8■■□□□ 1.4
SEC13-217ENST00000482647 BCAS3Q9H6U6 928 aa23.8■■□□□ 1.4
SEC13-217ENST00000482647 KIAA1217Q5T5P2 1943 aa23.8■■□□□ 1.4
SEC13-217ENST00000482647 CCDC194A0A1B0GVG4 234 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 H0YGN5 161 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 CIITAP33076 1130 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 KRT2P35908 639 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 CDK7P50613 346 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 PSMC6P62333 389 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 TLE2Q04725 743 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 NONOQ15233 471 aaKnown RBP eCLIP23.79■■□□□ 1.4
SEC13-217ENST00000482647 ANKRD33Q7Z3H0 272 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 PLA2G4DQ86XP0 818 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 TBCKQ8TEA7 893 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms