RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 PTGS1P23219 599 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 TNFAIP2Q03169 654 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 TTLL4Q14679 1199 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 LY6KQ17RY6 165 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 GJC2Q5T442 439 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 PLA2G4DQ86XP0 818 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 ZSCAN16Q9H4T2 348 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 JADE2Q9NQC1 790 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 ADCY6O43306 1168 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 FIBPO43427 364 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 ARIH2O95376 493 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 NOL7Q9UMY1 257 aaKnown RBP22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 TCHHQ07283 1943 aa22.62■■□□□ 1.21
TRAPPC12-220ENST00000482645 WNT7AO00755 349 aa22.61■■□□□ 1.21
TRAPPC12-220ENST00000482645 SMPD1P17405 629 aa22.61■■□□□ 1.21
TRAPPC12-220ENST00000482645 IQSEC1Q6DN90 963 aa22.61■■□□□ 1.21
TRAPPC12-220ENST00000482645 FAM173BQ6P4H8 233 aa22.61■■□□□ 1.21
TRAPPC12-220ENST00000482645 BRAPQ7Z569 592 aa22.61■■□□□ 1.21
TRAPPC12-220ENST00000482645 GPRASP2Q96D09 838 aa22.61■■□□□ 1.21
TRAPPC12-220ENST00000482645 KCNH7Q9NS40 1196 aa22.61■■□□□ 1.21
TRAPPC12-220ENST00000482645 DDX20Q9UHI6 824 aaKnown RBP22.61■■□□□ 1.21
TRAPPC12-220ENST00000482645 DDX25Q9UHL0 483 aaKnown RBP22.61■■□□□ 1.21
TRAPPC12-220ENST00000482645 IGLV3-22A0A075B6J6 115 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 MEIS1O00470 390 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 MYCNP04198 464 aaPredicted RBP22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 ARP10275 920 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 RARBP10826 455 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 CIITAP33076 1130 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 SEMA3FQ13275 785 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 NBR1Q14596 966 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 COPS5Q92905 334 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 CHAMP1Q96JM3 812 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 CDHR1Q96JP9 859 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 DEFB118Q96PH6 123 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 ATP6V1DQ9Y5K8 247 aa22.6■■□□□ 1.21
TRAPPC12-220ENST00000482645 RBM47A0AV96 593 aaKnown RBP22.59■■□□□ 1.21
TRAPPC12-220ENST00000482645 SPATA31C2B4DYI2 1134 aa22.59■■□□□ 1.21
TRAPPC12-220ENST00000482645 SLC37A4O43826 429 aa22.59■■□□□ 1.21
TRAPPC12-220ENST00000482645 SETQ01105 290 aaPredicted RBP22.59■■□□□ 1.21
TRAPPC12-220ENST00000482645 DDX41Q9UJV9 622 aaKnown RBP22.59■■□□□ 1.21
TRAPPC12-220ENST00000482645 GCFC2P16383 781 aaKnown RBP22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 UBA1P22314 1058 aaKnown RBP22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 ICAM3P32942 547 aa22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 MCM7P33993 719 aa22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 SP2Q02086 613 aa22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 DUSP28Q4G0W2 176 aa22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 TTC38Q5R3I4 469 aa22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 CCDC62Q6P9F0 684 aa22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 KCNV1Q6PIU1 500 aa22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 NAP1L4Q99733 375 aaKnown RBP22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 PAK6Q9NQU5 681 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC12-220ENST00000482645 MSCO60682 206 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 ATP9AO75110 1047 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 TGFB3P10600 412 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 ZNF174Q15697 407 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 PPP4R3AQ6IN85 833 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 MOXD1Q6UVY6 613 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 NIPA1Q7RTP0 329 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 TLK2Q86UE8 772 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 OR6J1Q8NGC5 347 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 LENG9Q96B70 501 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 ZNF577Q9BSK1 485 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 AGO4Q9HCK5 861 aaKnown RBP22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 DOCK5Q9H7D0 1870 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 CYP3A7-CYP3A51PA0A087WV96 503 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 DYNC1LI2O43237 492 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 GGPS1O95749 300 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 CYP3A7P24462 503 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 TOB1P50616 345 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 SP4Q02446 784 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 Q4G0T1 1027 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 RILPL1Q5EBL4 403 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 MYSM1Q5VVJ2 828 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 TNS4Q8IZW8 715 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 GJA10Q969M2 543 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 TMEM106CQ9BVX2 250 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 BCAS3Q9H6U6 928 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 XPNPEP3Q9NQH7 507 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 GNEQ9Y223 722 aaKnown RBP22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 PCDHB6Q9Y5E3 794 aa22.57■■□□□ 1.2
TRAPPC12-220ENST00000482645 DDX39AO00148 427 aaKnown RBP22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 MAFGO15525 162 aa22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 MARCH6O60337 910 aa22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 NEMFO60524 1076 aa22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 DUSP11O75319 330 aaKnown RBP22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 PGK1P00558 417 aa22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 NCLP19338 710 aaKnown RBP22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 TRAPPC10P48553 1259 aa22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 DNM1Q05193 864 aaKnown RBP22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 CYFIP1Q7L576 1253 aa22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 DHX37Q8IY37 1157 aaKnown RBP22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 AP5M1Q9H0R1 490 aa22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 MLXIPQ9HAP2 919 aa22.56■■□□□ 1.2
TRAPPC12-220ENST00000482645 IPO5O00410 1097 aaKnown RBP22.55■■□□□ 1.2
TRAPPC12-220ENST00000482645 NKRFO15226 690 aaKnown RBP eCLIP22.55■■□□□ 1.2
TRAPPC12-220ENST00000482645 MSH4O15457 936 aa22.55■■□□□ 1.2
TRAPPC12-220ENST00000482645 GH1P01241 217 aa22.55■■□□□ 1.2
TRAPPC12-220ENST00000482645 KCNA2P16389 499 aa22.55■■□□□ 1.2
TRAPPC12-220ENST00000482645 IRX5P78411 483 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms