RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 CCDC12Q8WUD4 166 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1-206ENST00000482632 PTCD2Q8WV60 388 aaKnown RBP11.47□□□□□ -0.57
SPTLC1-206ENST00000482632 MARVELD3Q96A59 401 aa11.47□□□□□ -0.57
SPTLC1-206ENST00000482632 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
SPTLC1-206ENST00000482632 PDCD2LQ9BRP1 358 aa11.47□□□□□ -0.57
SPTLC1-206ENST00000482632 TPCN1Q9ULQ1 816 aa11.47□□□□□ -0.57
SPTLC1-206ENST00000482632 MRVI1Q9Y6F6 885 aa11.47□□□□□ -0.57
SPTLC1-206ENST00000482632 PRPF3O43395 683 aaKnown RBP11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 CDKL5O76039 1030 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 IFNAR1P17181 557 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 EDNRBP24530 442 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 EVCP57679 992 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 CHMP4BP1P59074 171 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 SCRN1Q12765 414 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 KCNA10Q16322 511 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 LY6KQ17RY6 165 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 TMEM63BQ5T3F8 832 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 COPS5Q92905 334 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 RNF26Q9BY78 433 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 BARHL2Q9NY43 387 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 RTEL1Q9NZ71 1219 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 VPS54Q9P1Q0 977 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 ATP11BQ9Y2G3 1177 aa11.46□□□□□ -0.57
SPTLC1-206ENST00000482632 TRIOBPQ9H2D6 2365 aa11.46□□□□□ -0.58
SPTLC1-206ENST00000482632 CUL9Q8IWT3 2517 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 MEIS2O14770 477 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 ZEB2O60315 1214 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 ADAMTS4O75173 837 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 LARGE1O95461 756 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 MYL3P08590 195 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 FOSBP53539 338 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 GJA9P57773 515 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 NLRP5P59047 1200 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 NTRK3Q16288 839 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 FSCN1Q16658 493 aaKnown RBP11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 DUSP28Q4G0W2 176 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 JAKMIP3Q5VZ66 844 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 TYW1BQ6NUM6 668 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 UBE2Q1Q7Z7E8 422 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 PCSK9Q8NBP7 692 aaKnown RBP11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 CCDC148Q8NFR7 591 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 C6orf50Q9HD87 102 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 RIC8AQ9NPQ8 531 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 TMEM260Q9NX78 707 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 PCDHA6Q9UN73 950 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 PCDHA8Q9Y5H6 950 aa11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 RANBP2P49792 3224 aaKnown RBP11.45□□□□□ -0.58
SPTLC1-206ENST00000482632 CEP290O15078 2479 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 A0A1W2PQ45 241 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 A0A1W2PQY0 241 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 PIK3CDO00329 1044 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 NKRFO15226 690 aaKnown RBP eCLIP11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 PFKFB2O60825 505 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 EIF3JO75822 258 aaKnown RBP11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 ARIH2O95376 493 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 DEXIO95424 95 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 GH1P01241 217 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 ASGR1P07306 291 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 ACLYP53396 1101 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 RTP1P59025 263 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 GHRHRQ02643 423 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 PKN1Q16512 942 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 ME3Q16798 604 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 LRRC26Q2I0M4 334 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 GNPTABQ3T906 1256 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 BRDTQ58F21 947 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 GLT8D2Q9H1C3 349 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 UPF3AQ9H1J1 476 aaKnown RBP11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 ALDH8A1Q9H2A2 487 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 STARD7Q9NQZ5 370 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 PKD2L1Q9P0L9 805 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 GNEQ9Y223 722 aaKnown RBP11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
SPTLC1-206ENST00000482632 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 SYN1P17600 705 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 GNA11P29992 359 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 ZNF76P36508 570 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 RBM25P49756 843 aaKnown RBP11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 CPT1AP50416 773 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 SP4Q02446 784 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 RABEP1Q15276 862 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 CXCL17Q6UXB2 119 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 NLRX1Q86UT6 975 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 VSIG10LQ86VR7 867 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 CCDC83Q8IWF9 413 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 DHX37Q8IY37 1157 aaKnown RBP11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 REXO1Q8N1G1 1221 aaKnown RBP11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 SLC17A8Q8NDX2 589 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 GLT1D1Q96MS3 346 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 AIFM3Q96NN9 605 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 TSEN34Q9BSV6 310 aaKnown RBP11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 ANO3Q9BYT9 981 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 PRDM5Q9NQX1 630 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 ORC3Q9UBD5 711 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 ZMYND8Q9ULU4 1186 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 PHF24Q9UPV7 400 aa11.43□□□□□ -0.58
SPTLC1-206ENST00000482632 RBM47A0AV96 593 aaKnown RBP11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 GGPS1O95749 300 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms