RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 KIAA1671Q9BY89 1806 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 DNAJC25-GNG10A0A024R161 153 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 ARHGAP6O43182 974 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 IFIT1P09914 478 aaKnown RBP8.04□□□□□ -1.12
CHD6-209ENST00000482596 BMPR1AP36894 532 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 GGCXP38435 758 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 TMPOP42166 694 aaKnown RBP8.04□□□□□ -1.12
CHD6-209ENST00000482596 COL28A1Q2UY09 1125 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 LRRC8DQ7L1W4 858 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 ARMCX2Q7L311 632 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 RIOX2Q8IUF8 465 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 TMEFF1Q8IYR6 380 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 GLIS3Q8NEA6 775 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 MAP4K1Q92918 833 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 RUNDC1Q96C34 613 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 CTAGE1Q96RT6 745 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 C11orf84Q9BUA3 381 aaPredicted RBP8.04□□□□□ -1.12
CHD6-209ENST00000482596 AP5M1Q9H0R1 490 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 DLGAP2Q9P1A6 1054 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 LIMD1Q9UGP4 676 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 WASF3Q9UPY6 502 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 GPSM3Q9Y4H4 160 aa8.04□□□□□ -1.12
CHD6-209ENST00000482596 DDX49Q9Y6V7 483 aaKnown RBP8.04□□□□□ -1.12
CHD6-209ENST00000482596 COL12A1Q99715 3063 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 PLXNA4Q9HCM2 1894 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 A0A1W2PRG0 241 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 PER2O15055 1255 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 SPTLC1O15269 473 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 ZEB2O60315 1214 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 EFCAB14O75071 495 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 FLOT1O75955 427 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 C1QL1O75973 258 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 SELPP16109 830 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 CLCN1P35523 988 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 SRSF1Q07955 248 aaKnown RBP eCLIP8.03□□□□□ -1.122e-6■■□□□ 11.7
CHD6-209ENST00000482596 FUT2Q10981 343 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 MBTPS1Q14703 1052 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 NEUROD2Q15784 382 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 SCUBE3Q8IX30 993 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 CCDC144CPQ8IYA2 1237 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 TEX11Q8IYF3 940 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 FAM133AQ8N9E0 248 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 AFAP1L1Q8TED9 768 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 DHX38Q92620 1227 aaKnown RBP8.03□□□□□ -1.12
CHD6-209ENST00000482596 ABCF2Q9UG63 623 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 PALD1Q9ULE6 856 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 NR2E1Q9Y466 385 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 FOCADQ5VW36 1801 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 PATJQ8NI35 1801 aa8.03□□□□□ -1.12
CHD6-209ENST00000482596 UBR5O95071 2799 aaPredicted RBP8.03□□□□□ -1.12
CHD6-209ENST00000482596 SPTAN1Q13813 2472 aaKnown RBP8.03□□□□□ -1.12
CHD6-209ENST00000482596 KRBA1A5PL33 1030 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 TM4SF5O14894 197 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 AMHP03971 560 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 RB1P06400 928 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 CD46P15529 392 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 PURAQ00577 322 aaKnown RBP8.02□□□□□ -1.13
CHD6-209ENST00000482596 MECOMQ03112 1051 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 TBC1D8BQ0IIM8 1120 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 C19orf57Q0VDD7 668 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 PUM3Q15397 648 aaKnown RBP8.02□□□□□ -1.13
CHD6-209ENST00000482596 LINS1Q8NG48 757 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 KLHDC4Q8TBB5 520 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 SPATA18Q8TC71 538 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 SH3RF3Q8TEJ3 882 aaPredicted RBP8.02□□□□□ -1.13
CHD6-209ENST00000482596 ATP8B4Q8TF62 1192 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 DDX1Q92499 740 aaKnown RBP8.02□□□□□ -1.13
CHD6-209ENST00000482596 DDX11Q96FC9 970 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 TRIM34Q9BYJ4 488 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 EPC1Q9H2F5 836 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 POMKQ9H5K3 350 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 PDGFCQ9NRA1 345 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 FBXL21Q9UKT6 434 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 SRPK3Q9UPE1 567 aa8.02□□□□□ -1.13
CHD6-209ENST00000482596 MYL3P08590 195 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 GLULP15104 373 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 GUCY1A2P33402 732 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 STAT3P40763 770 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 MCAMP43121 646 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 LMOD3Q0VAK6 560 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 FOXC1Q12948 553 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 LPAL2Q16609 132 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 IL31Q6EBC2 164 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 SYCE2Q6PIF2 218 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 PRR23CQ6ZRP0 262 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 FOXP4Q8IVH2 680 aaPredicted RBP8.01□□□□□ -1.13
CHD6-209ENST00000482596 MAPKAPK5Q8IW41 473 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 FIBCD1Q8N539 461 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 MAGEB6Q8N7X4 407 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 C8orf58Q8NAV2 365 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 TOP1MTQ969P6 601 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 PPP2R3CQ969Q6 453 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 TMUB1Q9BVT8 246 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 DHX36Q9H2U1 1008 aaKnown RBP8.01□□□□□ -1.13
CHD6-209ENST00000482596 FBXO28Q9NVF7 368 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 ZNF214Q9UL59 606 aaPredicted RBP8.01□□□□□ -1.13
CHD6-209ENST00000482596 PLAGL2Q9UPG8 496 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 NOD1Q9Y239 953 aa8.01□□□□□ -1.13
CHD6-209ENST00000482596 RAI2Q9Y5P3 530 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms