RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 PSEN2P49810 448 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 MFSD10Q14728 455 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 GNPTABQ3T906 1256 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 CELF3Q5SZQ8 465 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 GDF6Q6KF10 455 aaPredicted RBP15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 RAB11FIP4Q86YS3 637 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 SMARCC2Q8TAQ2 1214 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 AFAP1L1Q8TED9 768 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 SPATA33Q96N06 139 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 SPZ1Q9BXG8 430 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 HDAC6Q9UBN7 1215 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 SEC63Q9UGP8 760 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 GTF2IRD1Q9UHL9 959 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 PCDHA11Q9Y5I1 949 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 CUL9Q8IWT3 2517 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 CHD9Q3L8U1 2897 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 SH2B2O14492 632 aaPredicted RBP15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 PLEKHA8P1O95397 391 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 RXRAP19793 462 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 LIFRP42702 1097 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 RABGGTBP53611 331 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 KIAA0753Q2KHM9 967 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 CREB3L3Q68CJ9 461 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 CMTR1Q8N1G2 835 aaKnown RBP15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 PHOSPHO2Q8TCD6 241 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 LRRC2Q9BYS8 371 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 PRDM12Q9H4Q4 367 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 BCAS3Q9H6U6 928 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 ANO2Q9NQ90 1003 aa15.52■□□□□ 0.08
CTDSP1-208ENST00000482272 KIF28PB7ZC32 967 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 HAS3O00219 553 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 SORBS3O60504 671 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 F2P00734 622 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 SELPP16109 830 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 SP2Q02086 613 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 NEDD9Q14511 834 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 HSDL1Q3SXM5 330 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 RNF20Q5VTR2 975 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 CENPQQ7L2Z9 268 aaPredicted RBP15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 SLC9A7Q96T83 725 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 RTEL1Q9NZ71 1219 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 YBX2Q9Y2T7 364 aaKnown RBP15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 SLC12A7Q9Y666 1083 aa15.51■□□□□ 0.07
CTDSP1-208ENST00000482272 BAIAP3O94812 1187 aa15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 ZNF286BP0CG31 522 aa15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 HOXD8P13378 290 aaPredicted RBP15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 UBA1P22314 1058 aaKnown RBP15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 ICAM3P32942 547 aa15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 PTK7Q13308 1070 aa15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 BMP2KLQ5H9B9 411 aa15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 PPP2R2DQ66LE6 453 aa15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 SYNE3Q6ZMZ3 975 aa15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 SRBD1Q8N5C6 995 aaKnown RBP15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 COL25A1Q9BXS0 654 aaPredicted RBP15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 TELO2Q9Y4R8 837 aa15.5■□□□□ 0.07
CTDSP1-208ENST00000482272 FRMPD4Q14CM0 1322 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 PIK3CDO00329 1044 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 NOP56O00567 594 aaKnown RBP15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 CKBP12277 381 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 IGFBP4P22692 258 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 MRPS9P82933 396 aaKnown RBP15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 HIC1Q14526 733 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 XRRA1Q6P2D8 792 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 LRRC8DQ7L1W4 858 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 RASEFQ8IZ41 740 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 FANCBQ8NB91 859 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 PPM1EQ8WY54 764 aa15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 TRIP12Q14669 1992 aaPredicted RBP15.49■□□□□ 0.07
CTDSP1-208ENST00000482272 hCG_1642624A0A1W2PR95 340 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 SPATA31C2B4DYI2 1134 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 H3BRB1 525 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 MEIS2O14770 477 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 FIBPO43427 364 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 MYOGP15173 224 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 KCNJ6P48051 423 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 RBL2Q08999 1139 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 SEMA3FQ13275 785 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 GPNMBQ14956 572 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 ADCK5Q3MIX3 580 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 PCNX4Q63HM2 1172 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 USP17L6PQ6QN14 398 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 NLRX1Q86UT6 975 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 TET1Q8NFU7 2136 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 DHX38Q92620 1227 aaKnown RBP15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 TCEANC2Q96MN5 208 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 INPP4AQ96PE3 977 aaPredicted RBP15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 NEK1Q96PY6 1258 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 C16orf70Q9BSU1 422 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 USP26Q9BXU7 913 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 TUT1Q9H6E5 874 aaKnown RBP15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 PSTPIP2Q9H939 334 aa15.48■□□□□ 0.07
CTDSP1-208ENST00000482272 CNKSR3Q6P9H4 555 aa15.47■□□□□ 0.07
CTDSP1-208ENST00000482272 METTL7BQ6UX53 244 aa15.47■□□□□ 0.07
CTDSP1-208ENST00000482272 CYFIP1Q7L576 1253 aa15.47■□□□□ 0.07
CTDSP1-208ENST00000482272 CCDC82Q8N4S0 544 aa15.47■□□□□ 0.07
CTDSP1-208ENST00000482272 GIMAP8Q8ND71 665 aaPredicted RBP15.47■□□□□ 0.07
CTDSP1-208ENST00000482272 PRUNE2Q8WUY3 3088 aa15.47■□□□□ 0.07
CTDSP1-208ENST00000482272 SYMPKQ92797 1274 aaKnown RBP15.47■□□□□ 0.07
CTDSP1-208ENST00000482272 WNT8BQ93098 351 aa15.47■□□□□ 0.07
CTDSP1-208ENST00000482272 SENP7Q9BQF6 1050 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms