RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 TOX2Q96NM4 488 aa18.67■□□□□ 0.58
CCDC78-212ENST00000482152 LLPHQ9BRT6 129 aaKnown RBP18.67■□□□□ 0.58
CCDC78-212ENST00000482152 ANO3Q9BYT9 981 aa18.67■□□□□ 0.58
CCDC78-212ENST00000482152 RTEL1Q9NZ71 1219 aa18.67■□□□□ 0.58
CCDC78-212ENST00000482152 VPS54Q9P1Q0 977 aa18.67■□□□□ 0.58
CCDC78-212ENST00000482152 ORC3Q9UBD5 711 aaPredicted RBP18.67■□□□□ 0.58
CCDC78-212ENST00000482152 UBIAD1Q9Y5Z9 338 aa18.67■□□□□ 0.58
CCDC78-212ENST00000482152 A0A0U1RQG5 324 aaPredicted RBP18.66■□□□□ 0.58
CCDC78-212ENST00000482152 PPFIA4O75335 1185 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 RTP1P59025 263 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 DGKDQ16760 1214 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 MYSM1Q5VVJ2 828 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 NIPA1Q7RTP0 329 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 ANKRD33Q7Z3H0 272 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 DAGLBQ8NCG7 672 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 MLXIPQ9HAP2 919 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 JADE2Q9NQC1 790 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 PCDHA4Q9UN74 947 aa18.66■□□□□ 0.58
CCDC78-212ENST00000482152 ARVCFO00192 962 aa18.65■□□□□ 0.58
CCDC78-212ENST00000482152 PPFIA3O75145 1194 aa18.65■□□□□ 0.58
CCDC78-212ENST00000482152 CTDNEP1O95476 244 aa18.65■□□□□ 0.58
CCDC78-212ENST00000482152 CYP3A4P08684 503 aa18.65■□□□□ 0.58
CCDC78-212ENST00000482152 CDK7P50613 346 aa18.65■□□□□ 0.58
CCDC78-212ENST00000482152 IRX5P78411 483 aaPredicted RBP18.65■□□□□ 0.58
CCDC78-212ENST00000482152 PURAQ00577 322 aaKnown RBP18.65■□□□□ 0.58
CCDC78-212ENST00000482152 JAKMIP3Q5VZ66 844 aa18.65■□□□□ 0.58
CCDC78-212ENST00000482152 CXCL17Q6UXB2 119 aa18.65■□□□□ 0.58
CCDC78-212ENST00000482152 COPS5Q92905 334 aa18.65■□□□□ 0.58
CCDC78-212ENST00000482152 MXRA8Q9BRK3 442 aa18.65■□□□□ 0.58
CCDC78-212ENST00000482152 MTG1Q9BT17 334 aaPredicted RBP18.65■□□□□ 0.58
CCDC78-212ENST00000482152 DCDC2CA8MYV0 355 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 GGPS1O95749 300 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 ITGB5P18084 799 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 UBA1P22314 1058 aaKnown RBP18.64■□□□□ 0.57
CCDC78-212ENST00000482152 ARHGAP4P98171 946 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 SP2Q02086 613 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 MTMR1Q13613 665 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 CEP55Q53EZ4 464 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 METTL7BQ6UX53 244 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 C7orf61Q8IZ16 206 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 BLIDQ8IZY5 108 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 SLC43A3Q8NBI5 491 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 NSUN7Q8NE18 718 aaKnown RBP18.64■□□□□ 0.57
CCDC78-212ENST00000482152 AFG1LQ8WV93 481 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 TMEM260Q9NX78 707 aa18.64■□□□□ 0.57
CCDC78-212ENST00000482152 KIAA1217Q5T5P2 1943 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 MEIS1O00470 390 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 LARGE1O95461 756 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 MMP3P08254 477 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 MYL3P08590 195 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 HOXD8P13378 290 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-212ENST00000482152 ZNF76P36508 570 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 USP11P51784 963 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 ITGA7Q13683 1181 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 TRIM60Q495X7 471 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 CRYGNQ8WXF5 182 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 SPATA33Q96N06 139 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 PHF20Q9BVI0 1012 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 PRKAG2Q9UGJ0 569 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 ATP11BQ9Y2G3 1177 aa18.63■□□□□ 0.57
CCDC78-212ENST00000482152 H0YGN5 161 aa18.62■□□□□ 0.57
CCDC78-212ENST00000482152 TLR3O15455 904 aaKnown RBP18.62■□□□□ 0.57
CCDC78-212ENST00000482152 FDPSP14324 419 aaKnown RBP18.62■□□□□ 0.57
CCDC78-212ENST00000482152 PTGS1P23219 599 aa18.62■□□□□ 0.57
CCDC78-212ENST00000482152 HMGN5P82970 282 aaKnown RBP18.62■□□□□ 0.57
CCDC78-212ENST00000482152 PTPN11Q06124 597 aaPredicted RBP18.62■□□□□ 0.57
CCDC78-212ENST00000482152 SEMA3FQ13275 785 aa18.62■□□□□ 0.57
CCDC78-212ENST00000482152 ZFP91Q96JP5 570 aaPredicted RBP18.62■□□□□ 0.57
CCDC78-212ENST00000482152 ALG1Q9BT22 464 aa18.62■□□□□ 0.57
CCDC78-212ENST00000482152 KATNAL1Q9BW62 490 aa18.62■□□□□ 0.57
CCDC78-212ENST00000482152 M0R2N6 131 aa18.61■□□□□ 0.57
CCDC78-212ENST00000482152 CIITAP33076 1130 aa18.61■□□□□ 0.57
CCDC78-212ENST00000482152 TLE2Q04725 743 aa18.61■□□□□ 0.57
CCDC78-212ENST00000482152 TRIM29Q14134 588 aa18.61■□□□□ 0.57
CCDC78-212ENST00000482152 NFRKBQ6P4R8 1299 aa18.61■□□□□ 0.57
CCDC78-212ENST00000482152 BRMS1Q9HCU9 246 aa18.61■□□□□ 0.57
CCDC78-212ENST00000482152 KCNH7Q9NS40 1196 aa18.61■□□□□ 0.57
CCDC78-212ENST00000482152 NFASCO94856 1347 aa18.6■□□□□ 0.57
CCDC78-212ENST00000482152 NOP56O00567 594 aaKnown RBP18.6■□□□□ 0.57
CCDC78-212ENST00000482152 SUPT20HL2P0C7V6 817 aa18.6■□□□□ 0.57
CCDC78-212ENST00000482152 KCNA2P16389 499 aa18.6■□□□□ 0.57
CCDC78-212ENST00000482152 SETQ01105 290 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-212ENST00000482152 HSDL1Q3SXM5 330 aa18.6■□□□□ 0.57
CCDC78-212ENST00000482152 CYFIP1Q7L576 1253 aa18.6■□□□□ 0.57
CCDC78-212ENST00000482152 KRT25Q7Z3Z0 450 aa18.6■□□□□ 0.57
CCDC78-212ENST00000482152 CCDC83Q8IWF9 413 aa18.6■□□□□ 0.57
CCDC78-212ENST00000482152 PGBD1Q96JS3 809 aa18.6■□□□□ 0.57
CCDC78-212ENST00000482152 AIFM3Q96NN9 605 aa18.6■□□□□ 0.57
CCDC78-212ENST00000482152 PQBP1O60828 265 aaKnown RBP18.59■□□□□ 0.57
CCDC78-212ENST00000482152 CLTBP09497 229 aa18.59■□□□□ 0.57
CCDC78-212ENST00000482152 NPY5RQ15761 445 aa18.59■□□□□ 0.57
CCDC78-212ENST00000482152 SDF4Q9BRK5 362 aa18.59■□□□□ 0.57
CCDC78-212ENST00000482152 GRIN2DO15399 1336 aa18.58■□□□□ 0.57
CCDC78-212ENST00000482152 KIAA0355O15063 1070 aa18.58■□□□□ 0.56
CCDC78-212ENST00000482152 ATP9AO75110 1047 aa18.58■□□□□ 0.56
CCDC78-212ENST00000482152 F2P00734 622 aa18.58■□□□□ 0.56
CCDC78-212ENST00000482152 FAAP100Q0VG06 881 aa18.58■□□□□ 0.56
CCDC78-212ENST00000482152 NONOQ15233 471 aaKnown RBP eCLIP18.58■□□□□ 0.56
CCDC78-212ENST00000482152 MOXD1Q6UVY6 613 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms