RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TMEM221A6NGB7 291 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 M0R296 226 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 STXBP3O00186 592 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 UPP2O95045 317 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 THPOP40225 353 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 FOXK2Q01167 660 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 SMAD4Q13485 552 aaKnown RBP17.56■□□□□ 0.4
HDAC6-224ENST00000481929 STXBP2Q15833 593 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 CTC1Q2NKJ3 1217 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 USH1GQ495M9 461 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 PLEKHG4Q58EX7 1191 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 TRIM67Q6ZTA4 783 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 SEPT8Q92599 483 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 EMID1Q96A84 441 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-224ENST00000481929 NLRC5Q86WI3 1866 aa17.56■□□□□ 0.4
HDAC6-224ENST00000481929 GFRA3O60609 400 aa17.55■□□□□ 0.4
HDAC6-224ENST00000481929 CTNNB1P35222 781 aa17.55■□□□□ 0.4
HDAC6-224ENST00000481929 DLX2Q07687 328 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-224ENST00000481929 HYAL1Q12794 435 aa17.55■□□□□ 0.4
HDAC6-224ENST00000481929 PPTC7Q8NI37 304 aa17.55■□□□□ 0.4
HDAC6-224ENST00000481929 NSUN6Q8TEA1 469 aaKnown RBP17.55■□□□□ 0.4
HDAC6-224ENST00000481929 TMEM47Q9BQJ4 181 aa17.55■□□□□ 0.4
HDAC6-224ENST00000481929 IFIH1Q9BYX4 1025 aaKnown RBP17.55■□□□□ 0.4
HDAC6-224ENST00000481929 LMAN2LQ9H0V9 348 aa17.55■□□□□ 0.4
HDAC6-224ENST00000481929 CHMP4BQ9H444 224 aaKnown RBP17.55■□□□□ 0.4
HDAC6-224ENST00000481929 DDX41Q9UJV9 622 aaKnown RBP17.55■□□□□ 0.4
HDAC6-224ENST00000481929 USP34Q70CQ2 3546 aa17.55■□□□□ 0.4
HDAC6-224ENST00000481929 RALGAPA2Q2PPJ7 1873 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 ORC4O43929 436 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 PDHBP11177 359 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 TCF15Q12870 199 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 LAMC2Q13753 1193 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 SERINC5Q86VE9 423 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 FIBCD1Q8N539 461 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 IWS1Q96ST2 819 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 C11orf84Q9BUA3 381 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-224ENST00000481929 MAF1Q9H063 256 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 TOMM22Q9NS69 142 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 CD207Q9UJ71 328 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 MRVI1Q9Y6F6 885 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 CFAP54Q96N23 3096 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 C5orf42Q9H799 3197 aa17.54■□□□□ 0.4
HDAC6-224ENST00000481929 RB1P06400 928 aa17.53■□□□□ 0.4
HDAC6-224ENST00000481929 ZNF543Q08ER8 600 aa17.53■□□□□ 0.4
HDAC6-224ENST00000481929 ZMYM1Q5SVZ6 1142 aa17.53■□□□□ 0.4
HDAC6-224ENST00000481929 SYTL5Q8TDW5 730 aaPredicted RBP17.53■□□□□ 0.4
HDAC6-224ENST00000481929 TAAR1Q96RJ0 339 aa17.53■□□□□ 0.4
HDAC6-224ENST00000481929 ANAPC4Q9UJX5 808 aa17.53■□□□□ 0.4
HDAC6-224ENST00000481929 RWDD3Q9Y3V2 267 aa17.53■□□□□ 0.4
HDAC6-224ENST00000481929 SPTBN4Q9H254 2564 aa17.53■□□□□ 0.4
HDAC6-224ENST00000481929 KIAA1217Q5T5P2 1943 aa17.53■□□□□ 0.4
HDAC6-224ENST00000481929 CACNA1AO00555 2505 aa17.52■□□□□ 0.4
HDAC6-224ENST00000481929 PTPRZ1P23471 2315 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-224ENST00000481929 C5orf67F2Z3F1 127 aa17.52■□□□□ 0.4
HDAC6-224ENST00000481929 TBX10O75333 385 aa17.52■□□□□ 0.4
HDAC6-224ENST00000481929 HIC1Q14526 733 aa17.52■□□□□ 0.4
HDAC6-224ENST00000481929 FBXL6Q8N531 539 aa17.52■□□□□ 0.4
HDAC6-224ENST00000481929 IL17RAQ96F46 866 aa17.52■□□□□ 0.4
HDAC6-224ENST00000481929 RMDN3Q96TC7 470 aa17.52■□□□□ 0.4
HDAC6-224ENST00000481929 FSD1Q9BTV5 496 aa17.52■□□□□ 0.4
HDAC6-224ENST00000481929 FAM86C1Q9NVL1 165 aa17.52■□□□□ 0.4
HDAC6-224ENST00000481929 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-224ENST00000481929 C17orf102A2RUQ5 167 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 GRM6O15303 877 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 FOXP2O15409 715 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 HOXD8P13378 290 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-224ENST00000481929 ZXDAP98168 799 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 RRP12Q5JTH9 1297 aaKnown RBP17.51■□□□□ 0.39
HDAC6-224ENST00000481929 ARHGEF16Q5VV41 709 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 TBC1D5Q92609 795 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 ATP6V0A1Q93050 837 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 IRF2BPLQ9H1B7 796 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 IGFLR1Q9H665 355 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 COL20A1Q9P218 1284 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 ATG2AQ2TAZ0 1938 aa17.51■□□□□ 0.39
HDAC6-224ENST00000481929 ABCB11O95342 1321 aa17.5■□□□□ 0.39
HDAC6-224ENST00000481929 CAND2O75155 1236 aa17.5■□□□□ 0.39
HDAC6-224ENST00000481929 PPFIA4O75335 1185 aa17.5■□□□□ 0.39
HDAC6-224ENST00000481929 EIF3JO75822 258 aaKnown RBP17.5■□□□□ 0.39
HDAC6-224ENST00000481929 CTSHP09668 335 aa17.5■□□□□ 0.39
HDAC6-224ENST00000481929 EIF2AK2P19525 551 aaKnown RBP17.5■□□□□ 0.39
HDAC6-224ENST00000481929 BMPR1AP36894 532 aa17.5■□□□□ 0.39
HDAC6-224ENST00000481929 NDUFV1P49821 464 aa17.5■□□□□ 0.39
HDAC6-224ENST00000481929 MCF2L2Q86YR7 1114 aa17.5■□□□□ 0.39
HDAC6-224ENST00000481929 APBB2Q92870 758 aa17.5■□□□□ 0.39
HDAC6-224ENST00000481929 TCP11L1Q9NUJ3 509 aa17.5■□□□□ 0.39
HDAC6-224ENST00000481929 LINC01565O15544 149 aa17.49■□□□□ 0.39
HDAC6-224ENST00000481929 CSPG5O95196 566 aa17.49■□□□□ 0.39
HDAC6-224ENST00000481929 FGRP09769 529 aa17.49■□□□□ 0.39
HDAC6-224ENST00000481929 SNHG28P0DPA3 235 aa17.49■□□□□ 0.39
HDAC6-224ENST00000481929 GTF2F1P35269 517 aaKnown RBP eCLIP17.49■□□□□ 0.393e-6■■■■□ 25.9
HDAC6-224ENST00000481929 GPATCH4Q5T3I0 446 aaKnown RBP17.49■□□□□ 0.39
HDAC6-224ENST00000481929 ATOH1Q92858 354 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-224ENST00000481929 PPP2R3CQ969Q6 453 aa17.49■□□□□ 0.39
HDAC6-224ENST00000481929 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
HDAC6-224ENST00000481929 ADGRA3Q8IWK6 1321 aa17.48■□□□□ 0.39
HDAC6-224ENST00000481929 KMT2EQ8IZD2 1858 aa17.48■□□□□ 0.39
HDAC6-224ENST00000481929 EYA4O95677 639 aa17.48■□□□□ 0.39
HDAC6-224ENST00000481929 NR3C2P08235 984 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms