RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PNMA8AQ86V59 439 aaPredicted RBP4.07□□□□□ -1.76
SMC6-208ENST00000481708 OR6P1Q8NGX9 317 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 SKA1Q96BD8 255 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 ZNF837Q96EG3 531 aaPredicted RBP4.07□□□□□ -1.76
SMC6-208ENST00000481708 FBRSQ9HAH7 460 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 C11orf16Q9NQ32 467 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 FAM86C1Q9NVL1 165 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 LCE2BO14633 110 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 PICALMQ13492 652 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 NTRK3Q16288 839 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 ZKSCAN2Q63HK3 967 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 CXorf57Q6NSI4 855 aaKnown RBP4.07□□□□□ -1.76
SMC6-208ENST00000481708 CRB3Q9BUF7 120 aa4.07□□□□□ -1.76
SMC6-208ENST00000481708 NFKB1P19838 968 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 ZNF165P49910 485 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 CYP4F3Q08477 520 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 OVOS1Q6IE37 1185 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 KIAA1211LQ6NV74 962 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 CFAP161Q6P656 301 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 GPR155Q7Z3F1 870 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 CRBNQ96SW2 442 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 PUS7LQ9H0K6 701 aaKnown RBP4.06□□□□□ -1.76
SMC6-208ENST00000481708 ALG13Q9NP73 1137 aaKnown RBP4.06□□□□□ -1.76
SMC6-208ENST00000481708 CDK5RAP2Q96SN8 1893 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 E2F8A0AVK6 867 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 K7ESF4 209 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 TPP1O14773 563 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 CBFA2T2O43439 604 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 SOD2P04179 222 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 JMJD7P0C870 316 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 RARAP10276 462 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 COPB2P35606 906 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 LBRQ14739 615 aaKnown RBP4.06□□□□□ -1.76
SMC6-208ENST00000481708 CCDC174Q6PII3 467 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 HDGFL2Q7Z4V5 671 aaPredicted RBP4.06□□□□□ -1.76
SMC6-208ENST00000481708 NXPE1Q8N323 547 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 GPR101Q96P66 508 aaPredicted RBP4.06□□□□□ -1.76
SMC6-208ENST00000481708 SLC26A8Q96RN1 970 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 FRMPD2Q68DX3 1309 aaPredicted RBP4.06□□□□□ -1.76
SMC6-208ENST00000481708 COL4A5P29400 1685 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 CAPN3P20807 821 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 SPEM2Q0P670 501 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 TRIM14Q14142 442 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 MLECQ14165 292 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 CCDC70Q6NSX1 233 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 CC2D1AQ6P1N0 951 aaPredicted RBP4.06□□□□□ -1.76
SMC6-208ENST00000481708 PDZD3Q86UT5 571 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 DRC7Q8IY82 874 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 TRIM22Q8IYM9 498 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 CMTR2Q8IYT2 770 aaKnown RBP4.06□□□□□ -1.76
SMC6-208ENST00000481708 LUC7LQ9NQ29 371 aaKnown RBP4.06□□□□□ -1.76
SMC6-208ENST00000481708 POLG2Q9UHN1 485 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 ASAP1Q9ULH1 1129 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 GTF2A1LQ9UNN4 478 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 WDR17Q8IZU2 1322 aa4.06□□□□□ -1.76
SMC6-208ENST00000481708 SNRPBP14678 240 aaKnown RBP4.05□□□□□ -1.76
SMC6-208ENST00000481708 YBX3P16989 372 aaKnown RBP eCLIP4.05□□□□□ -1.76
SMC6-208ENST00000481708 WWC2Q6AWC2 1192 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 FIGNL1Q6PIW4 674 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 HERPUD2Q9BSE4 406 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 MS4A5Q9H3V2 200 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.05□□□□□ -1.76
SMC6-208ENST00000481708 CGNL1Q0VF96 1302 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 LOC102724428A0A0B4J2F2 783 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GOLGA6CA6NDK9 693 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GOLGA6BA6NDN3 693 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GFRA2O00451 464 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 HIP1RO75146 1068 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GOLGA6DP0CG33 693 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 ITGA6P23229 1130 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GRIK1P39086 918 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 SIK1P57059 783 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 DACT2Q5SW24 774 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 HYIQ5T013 277 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 C1orf228Q6PIY5 440 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 SGCZQ96LD1 299 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 PRDM11Q9NQV5 511 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GOLGA6AQ9NYA3 693 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GMPR2Q9P2T1 348 aaKnown RBP4.05□□□□□ -1.76
SMC6-208ENST00000481708 EVLQ9UI08 416 aaPredicted RBP4.05□□□□□ -1.76
SMC6-208ENST00000481708 USP21Q9UK80 565 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 DOCK2Q92608 1830 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 ZBTB42B2RXF5 422 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GPR25O00155 361 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 NBPF7P0C2Y1 421 aaPredicted RBP4.05□□□□□ -1.76
SMC6-208ENST00000481708 MYBL2P10244 700 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 CREB3L3Q68CJ9 461 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 CHST15Q7LFX5 561 aaPredicted RBP4.05□□□□□ -1.76
SMC6-208ENST00000481708 IFNL2Q8IZJ0 200 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 CXorf38Q8TB03 319 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 PI4K2BQ8TCG2 481 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GTPBP3Q969Y2 492 aaKnown RBP4.05□□□□□ -1.76
SMC6-208ENST00000481708 ATG4CQ96DT6 458 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 TRIM47Q96LD4 638 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 NSUN5Q96P11 429 aaKnown RBP4.05□□□□□ -1.76
SMC6-208ENST00000481708 OSMRQ99650 979 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 SELENOOQ9BVL4 669 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 APOL5Q9BWW9 433 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 MIR1-1HGQ9H1L0 117 aa4.05□□□□□ -1.76
SMC6-208ENST00000481708 GGA3Q9NZ52 723 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms