RNA–Protein interactions for RNA: ENST00000481461.1

PLOD3-214, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-214ENST00000481461 MYSM1Q5VVJ2 828 aa21.67■■□□□ 1.06
PLOD3-214ENST00000481461 HERC6Q8IVU3 1022 aa21.67■■□□□ 1.06
PLOD3-214ENST00000481461 GPKOWQ92917 476 aaPredicted RBP eCLIP21.67■■□□□ 1.06
PLOD3-214ENST00000481461 KIF28PB7ZC32 967 aa21.66■■□□□ 1.06
PLOD3-214ENST00000481461 F2P00734 622 aa21.66■■□□□ 1.06
PLOD3-214ENST00000481461 CKBP12277 381 aa21.66■■□□□ 1.06
PLOD3-214ENST00000481461 UBA1P22314 1058 aaKnown RBP21.66■■□□□ 1.06
PLOD3-214ENST00000481461 ANTXR2P58335 489 aa21.66■■□□□ 1.06
PLOD3-214ENST00000481461 ZNF200P98182 395 aaPredicted RBP21.66■■□□□ 1.06
PLOD3-214ENST00000481461 SP2Q02086 613 aa21.66■■□□□ 1.06
PLOD3-214ENST00000481461 CELF3Q5SZQ8 465 aaKnown RBP21.66■■□□□ 1.06
PLOD3-214ENST00000481461 KCNV1Q6PIU1 500 aa21.66■■□□□ 1.06
PLOD3-214ENST00000481461 TMCO2Q7Z6W1 182 aaPredicted RBP21.66■■□□□ 1.06
PLOD3-214ENST00000481461 PHOSPHO2Q8TCD6 241 aa21.66■■□□□ 1.06
PLOD3-214ENST00000481461 MYL10Q9BUA6 226 aa21.66■■□□□ 1.06
PLOD3-214ENST00000481461 MLXIPQ9HAP2 919 aa21.66■■□□□ 1.06
PLOD3-214ENST00000481461 RBM8AQ9Y5S9 174 aaKnown RBP21.66■■□□□ 1.06
PLOD3-214ENST00000481461 PTPRSQ13332 1948 aa21.65■■□□□ 1.06
PLOD3-214ENST00000481461 BAIAP3O94812 1187 aa21.65■■□□□ 1.06
PLOD3-214ENST00000481461 GPNMBQ14956 572 aa21.65■■□□□ 1.06
PLOD3-214ENST00000481461 SAMD3Q8N6K7 520 aa21.65■■□□□ 1.06
PLOD3-214ENST00000481461 ATXN2LQ8WWM7 1075 aaKnown RBP21.65■■□□□ 1.06
PLOD3-214ENST00000481461 ARNTL2Q8WYA1 636 aa21.65■■□□□ 1.06
PLOD3-214ENST00000481461 MAP4K1Q92918 833 aa21.65■■□□□ 1.06
PLOD3-214ENST00000481461 HAS3O00219 553 aa21.64■■□□□ 1.05
PLOD3-214ENST00000481461 TLL1O43897 1013 aa21.64■■□□□ 1.05
PLOD3-214ENST00000481461 PPFIA4O75335 1185 aa21.64■■□□□ 1.05
PLOD3-214ENST00000481461 ARHGEF15O94989 841 aa21.64■■□□□ 1.05
PLOD3-214ENST00000481461 SKIV2LQ15477 1246 aaKnown RBP21.64■■□□□ 1.05
PLOD3-214ENST00000481461 MB21D2Q8IYB1 491 aaPredicted RBP21.64■■□□□ 1.05
PLOD3-214ENST00000481461 IGDCC4Q8TDY8 1250 aa21.64■■□□□ 1.05
PLOD3-214ENST00000481461 WNT8BQ93098 351 aa21.64■■□□□ 1.05
PLOD3-214ENST00000481461 ZBED2Q9BTP6 218 aa21.64■■□□□ 1.05
PLOD3-214ENST00000481461 SPTBN5Q9NRC6 3674 aaKnown RBP21.64■■□□□ 1.05
PLOD3-214ENST00000481461 DOCK5Q9H7D0 1870 aa21.63■■□□□ 1.05
PLOD3-214ENST00000481461 EPOPA6NHQ4 379 aa21.63■■□□□ 1.05
PLOD3-214ENST00000481461 NBNO60934 754 aa21.63■■□□□ 1.05
PLOD3-214ENST00000481461 WDR5P61964 334 aaKnown RBP21.63■■□□□ 1.05
PLOD3-214ENST00000481461 TAP1Q03518 808 aa21.63■■□□□ 1.05
PLOD3-214ENST00000481461 PTK7Q13308 1070 aa21.63■■□□□ 1.05
PLOD3-214ENST00000481461 ZNF654Q8IZM8 581 aa21.63■■□□□ 1.05
PLOD3-214ENST00000481461 CTCFLQ8NI51 663 aaPredicted RBP21.63■■□□□ 1.05
PLOD3-214ENST00000481461 ASB2Q96Q27 587 aa21.63■■□□□ 1.05
PLOD3-214ENST00000481461 BCAS3Q9H6U6 928 aa21.63■■□□□ 1.05
PLOD3-214ENST00000481461 RTEL1Q9NZ71 1219 aa21.63■■□□□ 1.05
PLOD3-214ENST00000481461 GTPBP6O43824 516 aaPredicted RBP21.62■■□□□ 1.05
PLOD3-214ENST00000481461 TGFB3P10600 412 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 DEFB103AP81534 67 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 MRPS5P82675 430 aaKnown RBP21.62■■□□□ 1.05
PLOD3-214ENST00000481461 HIC1Q14526 733 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 ZNF618Q5T7W0 954 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 KRT40Q6A162 431 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 CNKSR3Q6P9H4 555 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 CASC1Q6TDU7 716 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 NFXL1Q6ZNB6 911 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 SPRED2Q7Z698 418 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 IL27Q8NEV9 243 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 TSPYL2Q9H2G4 693 aaPredicted RBP21.62■■□□□ 1.05
PLOD3-214ENST00000481461 LY9Q9HBG7 655 aa21.62■■□□□ 1.05
PLOD3-214ENST00000481461 NOP56O00567 594 aaKnown RBP21.61■■□□□ 1.05
PLOD3-214ENST00000481461 PRC1O43663 620 aa21.61■■□□□ 1.05
PLOD3-214ENST00000481461 PARNO95453 639 aaKnown RBP21.61■■□□□ 1.05
PLOD3-214ENST00000481461 HOXD8P13378 290 aaPredicted RBP21.61■■□□□ 1.05
PLOD3-214ENST00000481461 MRPS9P82933 396 aaKnown RBP21.61■■□□□ 1.05
PLOD3-214ENST00000481461 RBL2Q08999 1139 aa21.61■■□□□ 1.05
PLOD3-214ENST00000481461 TCTN1Q2MV58 587 aa21.61■■□□□ 1.05
PLOD3-214ENST00000481461 GNPTABQ3T906 1256 aa21.61■■□□□ 1.05
PLOD3-214ENST00000481461 SMARCC2Q8TAQ2 1214 aa21.61■■□□□ 1.05
PLOD3-214ENST00000481461 RRP36Q96EU6 259 aaKnown RBP21.61■■□□□ 1.05
PLOD3-214ENST00000481461 C16orf70Q9BSU1 422 aa21.61■■□□□ 1.05
PLOD3-214ENST00000481461 PRRC2BQ5JSZ5 2229 aaKnown RBP21.61■■□□□ 1.05
PLOD3-214ENST00000481461 LCHNA4D1U4 455 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 CXCL10P02778 98 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 RXRAP19793 462 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 KIF5BP33176 963 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 THPOP40225 353 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 TRIM71Q2Q1W2 868 aaKnown RBP21.6■■□□□ 1.05
PLOD3-214ENST00000481461 FAM117BQ6P1L5 589 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 USP17L6PQ6QN14 398 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 CYFIP1Q7L576 1253 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 RAB11FIP4Q86YS3 637 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 CUL5Q93034 780 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 SEC63Q9UGP8 760 aaKnown RBP21.6■■□□□ 1.05
PLOD3-214ENST00000481461 MTCH2Q9Y6C9 303 aa21.6■■□□□ 1.05
PLOD3-214ENST00000481461 TCF20Q9UGU0 1960 aaKnown RBP21.59■■□□□ 1.05
PLOD3-214ENST00000481461 C17orf102A2RUQ5 167 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 CCDC69A6NI79 296 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 H3BRB1 525 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 TNFRSF10AO00220 468 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 DDAH1O94760 285 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 LGALS2P05162 132 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 SP4Q02446 784 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 IKBKEQ14164 716 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 CMTR1Q8N1G2 835 aaKnown RBP21.59■■□□□ 1.05
PLOD3-214ENST00000481461 ADAMTS19Q8TE59 1207 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 ATP6V0A1Q93050 837 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 TTC28Q96AY4 2481 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 TUT1Q9H6E5 874 aaKnown RBP21.59■■□□□ 1.05
PLOD3-214ENST00000481461 REV3LO60673 3130 aa21.59■■□□□ 1.05
PLOD3-214ENST00000481461 ABHD14A-ACY1A0A1B0GW23 586 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms