RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 PHKBQ93100 1093 aa23.11■■□□□ 1.29
VPS36-204ENST00000480923 SPATA33Q96N06 139 aa23.11■■□□□ 1.29
VPS36-204ENST00000480923 LARP6Q9BRS8 491 aaKnown RBP23.11■■□□□ 1.29
VPS36-204ENST00000480923 PPP1R12CQ9BZL4 782 aa23.11■■□□□ 1.29
VPS36-204ENST00000480923 ALDH8A1Q9H2A2 487 aaPredicted RBP23.11■■□□□ 1.29
VPS36-204ENST00000480923 MLXIPQ9HAP2 919 aa23.11■■□□□ 1.29
VPS36-204ENST00000480923 LTBP2Q14767 1821 aa23.1■■□□□ 1.29
VPS36-204ENST00000480923 PRPF3O43395 683 aaKnown RBP23.1■■□□□ 1.29
VPS36-204ENST00000480923 FIBPO43427 364 aa23.1■■□□□ 1.29
VPS36-204ENST00000480923 B4GALT4O60513 344 aa23.1■■□□□ 1.29
VPS36-204ENST00000480923 PPFIA3O75145 1194 aa23.1■■□□□ 1.29
VPS36-204ENST00000480923 ANAPC15P60006 121 aa23.1■■□□□ 1.29
VPS36-204ENST00000480923 MYSM1Q5VVJ2 828 aa23.1■■□□□ 1.29
VPS36-204ENST00000480923 NLRX1Q86UT6 975 aa23.1■■□□□ 1.29
VPS36-204ENST00000480923 PPP1R13LQ8WUF5 828 aa23.1■■□□□ 1.29
VPS36-204ENST00000480923 KIAA1217Q5T5P2 1943 aa23.1■■□□□ 1.29
VPS36-204ENST00000480923 TRIOBPQ9H2D6 2365 aa23.09■■□□□ 1.29
VPS36-204ENST00000480923 SPATA31C2B4DYI2 1134 aa23.09■■□□□ 1.29
VPS36-204ENST00000480923 ICAM3P32942 547 aa23.09■■□□□ 1.29
VPS36-204ENST00000480923 FPGSQ05932 587 aa23.09■■□□□ 1.29
VPS36-204ENST00000480923 ZNF274Q96GC6 653 aaPredicted RBP23.09■■□□□ 1.29
VPS36-204ENST00000480923 SLC26A6Q9BXS9 759 aa23.09■■□□□ 1.29
VPS36-204ENST00000480923 GLT8D2Q9H1C3 349 aa23.09■■□□□ 1.29
VPS36-204ENST00000480923 TRMT13Q9NUP7 481 aaKnown RBP23.09■■□□□ 1.29
VPS36-204ENST00000480923 RANBP2P49792 3224 aaKnown RBP23.08■■□□□ 1.29
VPS36-204ENST00000480923 SUPT20HL2P0C7V6 817 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 IFNAR1P17181 557 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 STK3Q13188 491 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 SEMA3FQ13275 785 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 NEDD9Q14511 834 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 NTRK3Q16288 839 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 NFRKBQ6P4R8 1299 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 TEX2Q8IWB9 1127 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 CCDC12Q8WUD4 166 aaPredicted RBP23.08■■□□□ 1.29
VPS36-204ENST00000480923 PGBD1Q96JS3 809 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 RNF26Q9BY78 433 aaPredicted RBP23.08■■□□□ 1.29
VPS36-204ENST00000480923 HIPK3Q9H422 1215 aa23.08■■□□□ 1.29
VPS36-204ENST00000480923 SOX1O00570 391 aaPredicted RBP23.07■■□□□ 1.28
VPS36-204ENST00000480923 CPLX1O14810 134 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 FOSP01100 380 aaPredicted RBP23.07■■□□□ 1.28
VPS36-204ENST00000480923 SHHQ15465 462 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 PKN1Q16512 942 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 HSDL1Q3SXM5 330 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 MFSD5Q6N075 450 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 TMEM199Q8N511 208 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 KAT2BQ92831 832 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 ANO3Q9BYT9 981 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 BCAS3Q9H6U6 928 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 TMEM260Q9NX78 707 aa23.07■■□□□ 1.28
VPS36-204ENST00000480923 NOP56O00567 594 aaKnown RBP23.06■■□□□ 1.28
VPS36-204ENST00000480923 SLC34A2O95436 690 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 ZNF286BP0CG31 522 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 CYP2C18P33260 490 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 PTPN11Q06124 597 aaPredicted RBP23.06■■□□□ 1.28
VPS36-204ENST00000480923 LRIT3Q3SXY7 679 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 C9orf50Q5SZB4 431 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 CYFIP1Q7L576 1253 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 GPRASP2Q96D09 838 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 CDHR1Q96JP9 859 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 KATNAL1Q9BW62 490 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 C6orf50Q9HD87 102 aa23.06■■□□□ 1.28
VPS36-204ENST00000480923 PPFIA4O75335 1185 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 SEC24BO95487 1268 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 CYP2C9P11712 490 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 ITGB5P18084 799 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 PSEN2P49810 448 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 EPHB4P54760 987 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 AP3B2Q13367 1082 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 PPIGQ13427 754 aaKnown RBP eCLIP23.05■■□□□ 1.282e-9■■■■■ 36.5
VPS36-204ENST00000480923 CPLX2Q6PUV4 134 aaKnown RBP23.05■■□□□ 1.28
VPS36-204ENST00000480923 METTL7BQ6UX53 244 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 TRIM22Q8IYM9 498 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 LRCH3Q96II8 777 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 ALG1Q9BT22 464 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 NOC4LQ9BVI4 516 aaKnown RBP23.05■■□□□ 1.28
VPS36-204ENST00000480923 NOD1Q9Y239 953 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 UBIAD1Q9Y5Z9 338 aa23.05■■□□□ 1.28
VPS36-204ENST00000480923 ESYT2A0FGR8 921 aa23.04■■□□□ 1.28
VPS36-204ENST00000480923 F2P00734 622 aa23.04■■□□□ 1.28
VPS36-204ENST00000480923 HOXD8P13378 290 aaPredicted RBP23.04■■□□□ 1.28
VPS36-204ENST00000480923 CLK2P49760 499 aaKnown RBP23.04■■□□□ 1.28
VPS36-204ENST00000480923 SP4Q02446 784 aa23.04■■□□□ 1.28
VPS36-204ENST00000480923 SSRP1Q08945 709 aaKnown RBP23.04■■□□□ 1.28
VPS36-204ENST00000480923 MTMR1Q13613 665 aa23.04■■□□□ 1.28
VPS36-204ENST00000480923 MFSD10Q14728 455 aa23.04■■□□□ 1.28
VPS36-204ENST00000480923 JAKMIP3Q5VZ66 844 aa23.04■■□□□ 1.28
VPS36-204ENST00000480923 SENP7Q9BQF6 1050 aa23.04■■□□□ 1.28
VPS36-204ENST00000480923 UMODL1Q5DID0 1318 aa23.04■■□□□ 1.28
VPS36-204ENST00000480923 CSF2RAP15509 400 aa23.03■■□□□ 1.28
VPS36-204ENST00000480923 CCL23P55773 120 aa23.03■■□□□ 1.28
VPS36-204ENST00000480923 KIAA0753Q2KHM9 967 aa23.03■■□□□ 1.28
VPS36-204ENST00000480923 C7orf31Q8N865 590 aa23.03■■□□□ 1.28
VPS36-204ENST00000480923 GIMAP8Q8ND71 665 aaPredicted RBP23.03■■□□□ 1.28
VPS36-204ENST00000480923 CCDC148Q8NFR7 591 aa23.03■■□□□ 1.28
VPS36-204ENST00000480923 ZMYND12Q9H0C1 365 aa23.03■■□□□ 1.28
VPS36-204ENST00000480923 JADE2Q9NQC1 790 aa23.03■■□□□ 1.28
VPS36-204ENST00000480923 PKD2L1Q9P0L9 805 aa23.03■■□□□ 1.28
VPS36-204ENST00000480923 SCN10AQ9Y5Y9 1956 aa23.02■■□□□ 1.28
VPS36-204ENST00000480923 GNA11P29992 359 aa23.02■■□□□ 1.28
VPS36-204ENST00000480923 ANKRD1Q15327 319 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms