RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 HELLSQ9NRZ9 838 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 FAM50BQ9Y247 325 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
TTC28-206ENST00000480563 PPFIA4O75335 1185 aa13.22□□□□□ -0.29
TTC28-206ENST00000480563 NR3C2P08235 984 aa13.22□□□□□ -0.29
TTC28-206ENST00000480563 EIF2AK2P19525 551 aaKnown RBP13.22□□□□□ -0.29
TTC28-206ENST00000480563 MX1P20591 662 aa13.22□□□□□ -0.29
TTC28-206ENST00000480563 THPOP40225 353 aa13.22□□□□□ -0.29
TTC28-206ENST00000480563 HAND2P61296 217 aa13.22□□□□□ -0.29
TTC28-206ENST00000480563 ZP2Q05996 745 aa13.22□□□□□ -0.29
TTC28-206ENST00000480563 CDC37Q16543 378 aaPredicted RBP13.22□□□□□ -0.29
TTC28-206ENST00000480563 MFSD6Q6ZSS7 791 aa13.22□□□□□ -0.29
TTC28-206ENST00000480563 YME1L1Q96TA2 773 aa13.22□□□□□ -0.29
TTC28-206ENST00000480563 PRKAG3Q9UGI9 489 aa13.22□□□□□ -0.29
TTC28-206ENST00000480563 C19orf67A6NJJ6 358 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 UPP2O95045 317 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 COL19A1Q14993 1142 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 MCMDC2Q4G0Z9 681 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 PLEKHG4Q58EX7 1191 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 SERINC5Q86VE9 423 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 TMEM192Q8IY95 271 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 ADGRF4Q8IZF3 695 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 TOP1MTQ969P6 601 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 EVI5LQ96CN4 794 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 ZKSCAN3Q9BRR0 538 aa13.21□□□□□ -0.29
TTC28-206ENST00000480563 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
TTC28-206ENST00000480563 NSUN3Q9H649 340 aaKnown RBP13.21□□□□□ -0.29
TTC28-206ENST00000480563 MRPL11Q9Y3B7 192 aaKnown RBP13.21□□□□□ -0.29
TTC28-206ENST00000480563 SORBS3O60504 671 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 HSPD1P10809 573 aaKnown RBP13.2□□□□□ -0.3
TTC28-206ENST00000480563 PCP11498 1178 aaKnown RBP13.2□□□□□ -0.3
TTC28-206ENST00000480563 HOXD8P13378 290 aaPredicted RBP13.2□□□□□ -0.3
TTC28-206ENST00000480563 QRICH1Q2TAL8 776 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 HSDL1Q3SXM5 330 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 MYSM1Q5VVJ2 828 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 DGKHQ86XP1 1220 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 ADHFE1Q8IWW8 467 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 SEPT8Q92599 483 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 FAM227BQ96M60 508 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 VAT1LQ9HCJ6 419 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 PXMP2Q9NR77 195 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 CLDND1Q9NY35 253 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 SIP14410 1827 aa13.2□□□□□ -0.3
TTC28-206ENST00000480563 C17orf102A2RUQ5 167 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 NCK2O43639 380 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 DHX16O60231 1041 aaKnown RBP13.19□□□□□ -0.3
TTC28-206ENST00000480563 CFBP00751 764 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 MYCLP12524 364 aaPredicted RBP13.19□□□□□ -0.3
TTC28-206ENST00000480563 IRS1P35568 1242 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 CELF3Q5SZQ8 465 aaKnown RBP13.19□□□□□ -0.3
TTC28-206ENST00000480563 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 ANKS1AQ92625 1134 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 ESR2Q92731 530 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 ATP6V0A1Q93050 837 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 MFSD14AQ96MC6 490 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 C16orf70Q9BSU1 422 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 PCDHB15Q9Y5E8 787 aa13.19□□□□□ -0.3
TTC28-206ENST00000480563 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 SALL3Q9BXA9 1300 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 A0A0D9SFI3 127 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.18□□□□□ -0.3
TTC28-206ENST00000480563 RGS20O76081 388 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 GGPS1O95749 300 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 LTBRP36941 435 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 KCNV1Q6PIU1 500 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 RPAINQ86UA6 219 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 PDCD2LQ9BRP1 358 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 IFIH1Q9BYX4 1025 aaKnown RBP13.18□□□□□ -0.3
TTC28-206ENST00000480563 OSBPL7Q9BZF2 842 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 RNF41Q9H4P4 317 aaPredicted RBP13.18□□□□□ -0.3
TTC28-206ENST00000480563 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 JMJD4Q9H9V9 463 aa13.18□□□□□ -0.3
TTC28-206ENST00000480563 H3BRB1 525 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 TREHO43280 583 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 CTSHP09668 335 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 HSD17B4P51659 736 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 SP2Q02086 613 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 CLUL1Q15846 466 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 CCDC178Q5BJE1 867 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 ZNF589Q86UQ0 364 aaPredicted RBP13.17□□□□□ -0.3
TTC28-206ENST00000480563 VSIG10LQ86VR7 867 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 FIBCD1Q8N539 461 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 RNPEPQ9H4A4 650 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 TUT1Q9H6E5 874 aaKnown RBP13.17□□□□□ -0.3
TTC28-206ENST00000480563 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
TTC28-206ENST00000480563 ZNF213O14771 459 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 OPLAHO14841 1288 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 CAND2O75155 1236 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 RB1P06400 928 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 SMIM10L2AP0DMW4 78 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 SMIM10L2BP0DMW5 78 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 TGFB3P10600 412 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 HOXC8P31273 242 aa13.16□□□□□ -0.3
TTC28-206ENST00000480563 CTNNB1P35222 781 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms