RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ZNF792Q3KQV3 632 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 CAVIN1Q6NZI2 390 aaKnown RBP19.84■□□□□ 0.77
UPF3A-206ENST00000480362 FMR1NBQ8N0W7 255 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-206ENST00000480362 IGSF22Q8N9C0 903 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 SLC5A5Q92911 643 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 MPHOSPH6Q99547 160 aaKnown RBP19.84■□□□□ 0.77
UPF3A-206ENST00000480362 ZNF577Q9BSK1 485 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 RAB34Q9BZG1 259 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 KCNH7Q9NS40 1196 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 DACT1Q9NYF0 836 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 KCNH3Q9ULD8 1083 aa19.84■□□□□ 0.77
UPF3A-206ENST00000480362 PP2D1A8MPX8 630 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 EIF3JO75822 258 aaKnown RBP19.83■□□□□ 0.77
UPF3A-206ENST00000480362 TBC1D8O95759 1140 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 EDNRBP24530 442 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 CDC25AP30304 524 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 SYKP43405 635 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 MTMR1Q13613 665 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 DPP9Q86TI2 863 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 INPP4AQ96PE3 977 aaPredicted RBP19.83■□□□□ 0.77
UPF3A-206ENST00000480362 PANK2Q9BZ23 570 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 AGO4Q9HCK5 861 aaKnown RBP19.83■□□□□ 0.77
UPF3A-206ENST00000480362 TMEM63CQ9P1W3 806 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 LRWD1Q9UFC0 647 aa19.83■□□□□ 0.77
UPF3A-206ENST00000480362 IPO5O00410 1097 aaKnown RBP19.82■□□□□ 0.76
UPF3A-206ENST00000480362 RGS20O76081 388 aa19.82■□□□□ 0.76
UPF3A-206ENST00000480362 ZNF202O95125 648 aa19.82■□□□□ 0.76
UPF3A-206ENST00000480362 UBA7P41226 1012 aa19.82■□□□□ 0.76
UPF3A-206ENST00000480362 LRCH2Q5VUJ6 765 aa19.82■□□□□ 0.76
UPF3A-206ENST00000480362 GPRASP2Q96D09 838 aa19.82■□□□□ 0.76
UPF3A-206ENST00000480362 RNF186Q9NXI6 227 aa19.82■□□□□ 0.76
UPF3A-206ENST00000480362 PKD2L1Q9P0L9 805 aa19.82■□□□□ 0.76
UPF3A-206ENST00000480362 LOC102724159A0A0B4J2E5 919 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 POTEMA6NI47 508 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 ASB14A6NK59 587 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 MAFGO15525 162 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 PSMD10O75832 226 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 TXLNAP40222 546 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 PWP2Q15269 919 aaKnown RBP19.81■□□□□ 0.76
UPF3A-206ENST00000480362 GNPTABQ3T906 1256 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 MORN1Q5T089 497 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 PDILTQ8N807 584 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 MORC4Q8TE76 937 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 SYAP1Q96A49 352 aaPredicted RBP19.81■□□□□ 0.76
UPF3A-206ENST00000480362 CCSER1Q9C0I3 900 aa19.81■□□□□ 0.76
UPF3A-206ENST00000480362 DDX19AQ9NUU7 478 aaKnown RBP19.81■□□□□ 0.76
UPF3A-206ENST00000480362 SPATA31C2B4DYI2 1134 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 POLR2DO15514 142 aaKnown RBP19.8■□□□□ 0.76
UPF3A-206ENST00000480362 GAS7O60861 476 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 KINO60870 393 aaKnown RBP19.8■□□□□ 0.76
UPF3A-206ENST00000480362 TRPA1O75762 1119 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 SPIRE1Q08AE8 756 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 MAP2K5Q13163 448 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 SEMA3FQ13275 785 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 OTOP1Q7RTM1 612 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 CABP7Q86V35 215 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 CDHR1Q96JP9 859 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 RIT2Q99578 217 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 TEKT3Q9BXF9 490 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 CFHR5Q9BXR6 569 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 VAV3Q9UKW4 847 aa19.8■□□□□ 0.76
UPF3A-206ENST00000480362 DIS3Q9Y2L1 958 aaKnown RBP19.8■□□□□ 0.76
UPF3A-206ENST00000480362 A0A087X0B3 334 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 TNPO2O14787 897 aaKnown RBP19.79■□□□□ 0.76
UPF3A-206ENST00000480362 DHX15O43143 795 aaKnown RBP19.79■□□□□ 0.76
UPF3A-206ENST00000480362 ATP9AO75110 1047 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 ICAM3P32942 547 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 CCDC183Q5T5S1 534 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 NCAPH2Q6IBW4 605 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 SEPT14Q6ZU15 432 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 EEPD1Q7L9B9 569 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 ZNF467Q7Z7K2 595 aaPredicted RBP19.79■□□□□ 0.76
UPF3A-206ENST00000480362 MMTAG2Q9BU76 263 aaKnown RBP19.79■□□□□ 0.76
UPF3A-206ENST00000480362 GZF1Q9H116 711 aaPredicted RBP19.79■□□□□ 0.76
UPF3A-206ENST00000480362 TBC1D22BQ9NU19 505 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 SLC5A4Q9NY91 659 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 PLXNA1Q9UIW2 1896 aa19.79■□□□□ 0.76
UPF3A-206ENST00000480362 CTGFP29279 349 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 ITGB3BPQ13352 177 aaPredicted RBP19.78■□□□□ 0.76
UPF3A-206ENST00000480362 PPP2R5CQ13362 524 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 KARSQ15046 597 aaKnown RBP19.78■□□□□ 0.76
UPF3A-206ENST00000480362 LONRF3Q496Y0 759 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 KRT79Q5XKE5 535 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 ARMCX2Q7L311 632 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 NPLOC4Q8TAT6 608 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 MAML3Q96JK9 1138 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 TIGD1Q96MW7 591 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 NUDT12Q9BQG2 462 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 NUP62CLQ9H1M0 184 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 CLSTN2Q9H4D0 955 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 CCDC39Q9UFE4 941 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 SERTAD1Q9UHV2 236 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 GJD2Q9UKL4 321 aa19.78■□□□□ 0.76
UPF3A-206ENST00000480362 ZNF236Q9UL36 1845 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 DDX39AO00148 427 aaKnown RBP19.77■□□□□ 0.76
UPF3A-206ENST00000480362 EML1O00423 815 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 HSPA6P17066 643 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 PSMC4P43686 418 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 FCGRTP55899 365 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 C1QTNF8P60827 252 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms